4PIW

Crystal structure of sugar aminotransferase WecE from Escherichia coli K-12


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.70 Å
  • R-Value Free: 0.275 
  • R-Value Work: 0.236 
  • R-Value Observed: 0.237 

wwPDB Validation   3D Report Full Report


This is version 2.1 of the entry. See complete history


Literature

Crystal structure of sugar aminotransferase WecE from Escherichia coli K-12

Wang, F.Xu, W.Helmich, K.E.Singh, S.Yennamalli, R.M.Bingman, C.A.Miller, M.D.Thorson, J.S.Phillips Jr., G.N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
TDP-4-keto-6-deoxy-D-glucose transaminase family proteinABCDEFGH396Escherichia coli K-12Mutation(s): 0 
Gene Names: wecErffAyifIb3791JW3765
EC: 2.6.1.59
Find proteins for P27833 (Escherichia coli (strain K12))
Explore P27833 
Go to UniProtKB:  P27833
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
LLP
Query on LLP
A,B,C,D,E,F,G,HL-PEPTIDE LINKINGC14 H22 N3 O7 PLYS
MSE
Query on MSE
A,B,C,D,E,F,G,HL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 125.341α = 90
b = 87.483β = 91.1
c = 161.554γ = 90
Software Package:
Software NamePurpose
XDSdata reduction
XDSdata scaling
PHENIXphasing
PDB_EXTRACTdata extraction
PHENIXrefinement
XSCALEdata scaling

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesU01GM098248

Revision History 

  • Version 1.0: 2014-07-16
    Type: Initial release
  • Version 1.1: 2015-10-14
    Changes: Data collection
  • Version 2.0: 2017-09-27
    Changes: Author supporting evidence, Derived calculations, Non-polymer description, Refinement description, Structure summary
  • Version 2.1: 2019-12-25
    Changes: Author supporting evidence