4NT6

HLA-C*0801 Crystal Structure


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.84 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.180 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

The immunodominant Influenza A virus M1<58-66> CTL epitope exhibits degenerate class I MHC restriction in humans

Choo, J.A.Liu, J.X.Toh, X.Y.Grotenbreg, G.M.Ren, E.C.

(2014) J.Virol. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
HLA class I histocompatibility antigen, Cw-8 alpha chain
A
274Homo sapiensMutation(s): 0 
Gene Names: HLA-C (HLAC)
Find proteins for P30505 (Homo sapiens)
Go to Gene View: HLA-C
Go to UniProtKB:  P30505
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Beta-2-microglobulin
B
99Homo sapiensMutation(s): 0 
Gene Names: B2M
Find proteins for P61769 (Homo sapiens)
Go to Gene View: B2M
Go to UniProtKB:  P61769
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Matrix protein 1
C
9Influenza A virusMutation(s): 0 
Gene Names: M1
Find proteins for D9J353 (Influenza A virus)
Go to UniProtKB:  D9J353
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.84 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.180 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 94.401α = 90.00
b = 75.687β = 120.29
c = 61.880γ = 90.00
Software Package:
Software NamePurpose
AMoREphasing
PROTEUM PLUSdata scaling
REFMACrefinement
PROTEUM PLUSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-07-23
    Type: Initial release