4LZS

Crystal Structure of BRD4(1) bound to inhibitor XD46


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

4-Acyl pyrroles: mimicking acetylated lysines in histone code reading.

Lucas, X.Wohlwend, D.Hugle, M.Schmidtkunz, K.Gerhardt, S.Schule, R.Jung, M.Einsle, O.Gunther, S.

(2013) Angew.Chem.Int.Ed.Engl. 52: 14055-14059


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Bromodomain-containing protein 4
A
127Homo sapiensMutation(s): 0 
Gene Names: BRD4 (HUNK1)
Find proteins for O60885 (Homo sapiens)
Go to Gene View: BRD4
Go to UniProtKB:  O60885
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
L46
Query on L46

Download SDF File 
Download CCD File 
A
4-acetyl-3-ethyl-N,5-dimethyl-1H-pyrrole-2-carboxamide
C11 H16 N2 O2
LCSLEHAEHBSCSA-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
L46Kd: 16000 nM BINDINGMOAD
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.192 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 37.420α = 90.00
b = 43.900β = 90.00
c = 77.530γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
MOSFLMdata reduction
PDB_EXTRACTdata extraction
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-01-15
    Type: Initial release