4JZG

Crystal structure of a single cambialistic SOD2 occupied by Manganese ion from Clostridium difficile


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.321 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.163 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of a single cambialistic SOD2 occupied by Manganese ion from Clostridium difficile

Li, W.Wang, C.L.Zhao, Y.Wang, H.F.Tan, S.X.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Superoxide dismutase
A
208Peptoclostridium difficile (strain 630)Mutation(s): 0 
Gene Names: sodA
EC: 1.15.1.1
Find proteins for Q186I6 (Peptoclostridium difficile (strain 630))
Go to UniProtKB:  Q186I6
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

Download SDF File 
Download CCD File 
A
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.321 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.163 
  • Space Group: P 65 2 2
Unit Cell:
Length (Å)Angle (°)
a = 80.593α = 90.00
b = 80.593β = 90.00
c = 249.509γ = 120.00
Software Package:
Software NamePurpose
ADSCdata collection
PHENIXrefinement
PHASESphasing
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-04-02
    Type: Initial release