4END

Crystal structure of anti-HIV actinohivin in complex with alpha-1,2-mannobiose (P 2 21 21 form)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.231 
  • R-Value Work: 0.164 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Matured structure of anti-HIV lectin actinohivin in complex with 1,2-mannobiose

Hoque, M.M.Suzuki, K.Tsunoda, M.Jiang, J.Zhang, F.Takahashi, A.Naomi, O.Zhang, X.Sekiguchi, T.Tanaka, H.Omura, S.Takenaka, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Actinohivin
A
114Actinomycete sp. (strain K97-0003)Gene Names: ath
Find proteins for Q9KWN0 (Actinomycete sp. (strain K97-0003))
Go to UniProtKB:  Q9KWN0
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CCN
Query on CCN

Download SDF File 
Download CCD File 
A
ACETONITRILE
C2 H3 N
WEVYAHXRMPXWCK-UHFFFAOYSA-N
 Ligand Interaction
2M4
Query on 2M4

Download SDF File 
Download CCD File 
A
2-O-alpha-D-mannopyranosyl-alpha-D-mannopyranose
C12 H22 O11
HIWPGCMGAMJNRG-LBGGPIGOSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.231 
  • R-Value Work: 0.164 
  • Space Group: P 2 21 21
Unit Cell:
Length (Å)Angle (°)
a = 27.840α = 90.00
b = 66.840β = 90.00
c = 67.060γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data collection
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
AMoREphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-07-17
    Type: Initial release