4E1Z

Structure of mouse Tyk-2 complexed to a 3-aminoindazole inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.197 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Enabling structure-based drug design of Tyk2 through co-crystallization with a stabilizing aminoindazole inhibitor.

Argiriadi, M.A.Goedken, E.R.Banach, D.Borhani, D.W.Burchat, A.Dixon, R.W.Marcotte, D.Overmeyer, G.Pivorunas, V.Sadhukhan, R.Sousa, S.Moore, N.S.Tomlinson, M.Voss, J.Wang, L.Wishart, N.Woller, K.Talanian, R.V.

(2012) Bmc Struct.Biol. 12: 22-22

  • DOI: 10.1186/1472-6807-12-22
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Structure-based drug design (SBDD) can accelerate inhibitor lead design and optimization, and efficient methods including protein purification, characterization, crystallization, and high-resolution diffraction are all needed for rapid, iterative str ...

    Structure-based drug design (SBDD) can accelerate inhibitor lead design and optimization, and efficient methods including protein purification, characterization, crystallization, and high-resolution diffraction are all needed for rapid, iterative structure determination. Janus kinases are important targets that are amenable to structure-based drug design. Here we present the first mouse Tyk2 crystal structures, which are complexed to 3-aminoindazole compounds.


    Organizational Affiliation

    Department of Molecular & Cellular Pharmacology, Abbott Laboratories, Worcester, MA, USA. maria.argiriadi@abbott.com




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Non-receptor tyrosine-protein kinase TYK2
A
291Mus musculusMutation(s): 1 
Gene Names: Tyk2
EC: 2.7.10.2
Find proteins for Q9R117 (Mus musculus)
Go to UniProtKB:  Q9R117
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
0MX
Query on 0MX

Download SDF File 
Download CCD File 
A
N-[5-(4-{[(3-chlorophenyl)sulfonyl]amino}phenyl)-1H-indazol-3-yl]furan-2-carboxamide
C24 H17 Cl N4 O4 S
LBIIPAPYSBCHHH-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
0MXIC50: 3 nM PDBBIND
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.197 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 68.030α = 90.00
b = 68.030β = 90.00
c = 152.999γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
HKL-2000data scaling
HKL-2000data reduction
HKL-2000data collection
BUSTERrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2012-10-03
    Type: Initial release