4BLK

CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS OSTREATUS - CRYSTAL FORM I


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.137 
  • R-Value Work: 0.130 
  • R-Value Observed: 0.131 

wwPDB Validation 3D Report Full Report



Literature

Ligninolytic Peroxidase Genes in the Oyster Mushroom Genome: Heterologous Expression, Molecular Structure, Catalytic and Stability Properties, and Lignin-Degrading Ability.

Fernandez-Fueyo, E.Ruiz-Duenas, F.J.Martinez, M.J.Romero, A.Hammel, K.E.Medrano, F.J.Martinez, A.T.

(2014) Biotechnol Biofuels 7: 2

  • DOI: 10.1186/1754-6834-7-2
  • Primary Citation of Related Structures:  
    4BLX, 4BLY, 4BLZ, 4BLN, 4BM0, 4BM1, 4BM2, 4BM3, 4BM4, 4BLK

  • PubMed Abstract: 
  • The genome of Pleurotus ostreatus, an important edible mushroom and a model ligninolytic organism of interest in lignocellulose biorefineries due to its ability to delignify agricultural wastes, was sequenced with the purpose of identifying and chara ...

    The genome of Pleurotus ostreatus, an important edible mushroom and a model ligninolytic organism of interest in lignocellulose biorefineries due to its ability to delignify agricultural wastes, was sequenced with the purpose of identifying and characterizing the enzymes responsible for lignin degradation.


    Organizational Affiliation

    Centro de Investigaciones Biológicas, Consejo Superior de Investigaciones Científicas (CSIC), Ramiro de Maeztu 9, E-28040 Madrid, Spain. kehammel@facstaff.wisc.edu.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
VERSATILE PEROXIDASE IA332Pleurotus ostreatusMutation(s): 0 
EC: 1.11.1.16
Find proteins for Q9UR19 (Pleurotus eryngii)
Explore Q9UR19 
Go to UniProtKB:  Q9UR19
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
HEM
Query on HEM

Download CCD File 
A
PROTOPORPHYRIN IX CONTAINING FE
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
 Ligand Interaction
CA
Query on CA

Download CCD File 
A
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.137 
  • R-Value Work: 0.130 
  • R-Value Observed: 0.131 
  • Space Group: P 43
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 96.5α = 90
b = 96.5β = 90
c = 38.38γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-01-15
    Type: Initial release