3R72

Apis mellifera odorant binding protein 5


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.173 
  • R-Value Work: 0.152 
  • R-Value Observed: 0.153 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of Apis mellifera odorant binding protein 5

Spinelli, S.Iovinella, I.Lagarde, A.Tegoni, M.Pelosi, P.Cambillau, C.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Odorant binding protein ASP5A122Apis melliferaMutation(s): 0 
UniProt
Find proteins for Q8WRW2 (Apis mellifera)
Explore Q8WRW2 
Go to UniProtKB:  Q8WRW2
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8WRW2
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NBB
Query on NBB

Download Ideal Coordinates CCD File 
B [auth A],
C [auth A]
N-BUTYL-BENZENESULFONAMIDE
C10 H15 N O2 S
IPRJXAGUEGOFGG-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.173 
  • R-Value Work: 0.152 
  • R-Value Observed: 0.153 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 37.695α = 90
b = 45.239β = 90
c = 70.882γ = 90
Software Package:
Software NamePurpose
ADSCdata collection
MOLREPphasing
REFMACrefinement
XDSdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-04-04
    Type: Initial release
  • Version 1.1: 2018-01-24
    Changes: Database references, Structure summary