Structural basis for inhibition of bacterial ATP synthase by subunit epsilon of the rotor stalk
Cingolani, G., Duncan, T.M.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ATP synthase subunit alpha | 513 | Escherichia coli DH1 | Mutation(s): 0  Gene Names: atpA, EcDH1_4233 EC: 3.6.3.14 (PDB Primary Data), 7.1.2.2 (UniProt) Membrane Entity: Yes  | ![]() | |
UniProt | |||||
Find proteins for P0ABB0 (Escherichia coli (strain K12)) Explore P0ABB0  Go to UniProtKB:  P0ABB0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ABB0 | ||||
Protein Feature ViewExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ATP synthase subunit beta | 459 | Escherichia coli DH1 | Mutation(s): 1  Gene Names: atpD, EcDH1_4235 EC: 3.6.3.14 (PDB Primary Data), 7.1.2.2 (UniProt) Membrane Entity: Yes  | ![]() | |
UniProt | |||||
Find proteins for P0ABB4 (Escherichia coli (strain K12)) Explore P0ABB4  Go to UniProtKB:  P0ABB4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ABB4 | ||||
Protein Feature ViewExpand | |||||
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Entity ID: 3 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ATP synthase gamma chain | G, O, W, EA [auth e] | 286 | Escherichia coli DH1 | Mutation(s): 0  Gene Names: EcDH1_4234 Membrane Entity: Yes  | ![]() |
UniProt | |||||
Find proteins for P0ABA6 (Escherichia coli (strain K12)) Explore P0ABA6  Go to UniProtKB:  P0ABA6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0ABA6 | ||||
Protein Feature ViewExpand | |||||
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Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
ATP synthase epsilon chain | H, P, X, FA [auth f] | 138 | Escherichia coli DH1 | Mutation(s): 0  Gene Names: atpC, EcDH1_4236 Membrane Entity: Yes  | ![]() |
UniProt | |||||
Find proteins for P0A6E6 (Escherichia coli (strain K12)) Explore P0A6E6  Go to UniProtKB:  P0A6E6 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0A6E6 | ||||
Protein Feature ViewExpand | |||||
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Ligands 4 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ANP Query on ANP | GA [auth A], GB [auth Q], IA [auth B], IB [auth R], KA [auth C], | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C10 H17 N6 O12 P3 PVKSNHVPLWYQGJ-KQYNXXCUSA-N | Ligand Interaction | ||
ADP Query on ADP | MA [auth D], MB [auth T], YB [auth b], ZA [auth L] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | Ligand Interaction | ||
SO4 Query on SO4 | AC [auth b], BB [auth L], BC [auth c], CB [auth M], CC [auth d], | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | Ligand Interaction | ||
MG Query on MG | AB [auth L], HA [auth A], HB [auth Q], JA [auth B], JB [auth R], | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | Ligand Interaction |
Length ( Å ) | Angle ( ˚ ) |
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a = 435.97 | α = 90 |
b = 183 | β = 108.99 |
c = 225.39 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
PDB_EXTRACT | data extraction |
HKL-2000 | data collection |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |