Structural basis for inhibition of bacterial ATP synthase by subunit epsilon of the rotor stalk
Cingolani, G., Duncan, T.M.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
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Molecule | Chains | Sequence Length | Organism | Details |
ATP synthase subunit alpha | A, B, C, I, J, K, Q, R, S, Y, Z, a | 513 | Escherichia coli (strain K12) | Gene Names: atpA (papA, uncA) EC: 3.6.3.14 |
Membrane proteinmpstruct | Group:  TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Sub Group:  F-type ATPase | Protein:  Subunit C of the F1FO ATP synthase | |
Find proteins for P0ABB0 (Escherichia coli (strain K12)) Go to UniProtKB:  P0ABB0 |
Entity ID: 2 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
ATP synthase subunit beta | D, E, F, L, M, N, T, U, V, b, c, d | 459 | Escherichia coli (strain K12) | Mutations: E81K Gene Names: atpD (papB, uncD) EC: 3.6.3.14 |
Membrane proteinmpstruct | Group:  TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Sub Group:  F-type ATPase | Protein:  Subunit C of the F1FO ATP synthase | |
Find proteins for P0ABB4 (Escherichia coli (strain K12)) Go to UniProtKB:  P0ABB4 |
Entity ID: 3 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
ATP synthase gamma chain | G, O, W, e | 286 | Escherichia coli (strain K12) | Gene Names: atpG (papC, uncG) |
Membrane proteinmpstruct | Group:  TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Sub Group:  F-type ATPase | Protein:  Subunit C of the F1FO ATP synthase | |
Find proteins for P0ABA6 (Escherichia coli (strain K12)) Go to UniProtKB:  P0ABA6 |
Entity ID: 4 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
ATP synthase epsilon chain | H, P, X, f | 138 | Escherichia coli (strain K12) | Gene Names: atpC (papG, uncC) |
Membrane proteinmpstruct | Group:  TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Sub Group:  F-type ATPase | Protein:  Subunit C of the F1FO ATP synthase | |
Find proteins for P0A6E6 (Escherichia coli (strain K12)) Go to UniProtKB:  P0A6E6 |
Ligands 4 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | b, c, D, d, E, F, G, H, L, M, N, O, P, T, U, V, W | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | ![]() |  Ligand Interaction | |
ADP Query on ADP | b, D, L, T | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | ![]() |  Ligand Interaction | |
ANP Query on ANP | A, a, B, C, I, J, K, Q, R, S, Y, Z | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER C10 H17 N6 O12 P3 PVKSNHVPLWYQGJ-KQYNXXCUSA-N | ![]() |  Ligand Interaction | |
MG Query on MG | a, A, b, B, C, D, I, J, K, L, Q, R, S, T, Y, Z | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | ![]() |  Ligand Interaction |
Length (Å) | Angle (°) |
---|---|
a = 435.970 | α = 90.00 |
b = 183.000 | β = 108.99 |
c = 225.390 | γ = 90.00 |
Software Name | Purpose |
---|---|
HKL-2000 | data reduction |
HKL-2000 | data collection |
PHENIX | refinement |
HKL-2000 | data scaling |
PHASER | phasing |
PDB_EXTRACT | data extraction |