3S97

PTPRZ CNTN1 complex

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2971 Å
  • R-Value Free: 0.255 
  • R-Value Work: 0.201 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history. 

Literature

A complex between contactin-1 and the protein tyrosine phosphatase PTPRZ controls the development of oligodendrocyte precursor cells.

Lamprianou, S., Chatzopoulou, E., Thomas, J.L., Bouyain, S., Harroch, S.

(2011) Proc.Natl.Acad.Sci.USA 108: 17498-17503

  • DOI: 10.1073/pnas.1108774108

  • PubMed Abstract: 

    • The six members of the contactin (CNTN) family of neural cell adhesion molecules are involved in the formation and maintenance of the central nervous system (CNS) and have been linked to mental retardation and neuropsychiatric disorders such as autis ...

    The six members of the contactin (CNTN) family of neural cell adhesion molecules are involved in the formation and maintenance of the central nervous system (CNS) and have been linked to mental retardation and neuropsychiatric disorders such as autism. Five of the six CNTNs bind to the homologous receptor protein tyrosine phosphatases gamma (PTPRG) and zeta (PTPRZ), but the biological roles of these interactions remain unclear. We report here the cocrystal structure of the carbonic anhydrase-like domain of PTPRZ bound to tandem Ig repeats of CNTN1 and combine these structural data with binding assays to show that PTPRZ binds specifically to CNTN1 expressed at the surface of oligodendrocyte precursor cells. Furthermore, analyses of glial cell populations in wild-type and PTPRZ-deficient mice show that the binding of PTPRZ to CNTN1 expressed at the surface of oligodendrocyte precursor cells inhibits their proliferation and promotes their development into mature oligodendrocytes. Overall, these results implicate the PTPRZ/CNTN1 complex as a previously unknown modulator of oligodendrogenesis.

    Organizational Affiliation: 

    Départment de Neuroscience, Institut Pasteur de Paris, 75624 Paris, France.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Receptor-type tyrosine-protein phosphatase zeta
A, B
273Homo sapiensMutation(s): 0 
Gene Names: PTPRZ1 (HTPZP2, PTPRZ, PTPRZ2, PTPZ)
EC: 3.1.3.48
Find proteins for P23471 (Homo sapiens)
Go to Gene View: PTPRZ1
Go to UniProtKB:  P23471
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Contactin-1
C, D
201Homo sapiensMutation(s): 0 
Gene Names: CNTN1
Find proteins for Q12860 (Homo sapiens)
Go to Gene View: CNTN1
Go to UniProtKB:  Q12860
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAG
Query on NAG
Download SDF File 
Download CCD File 
C, D
N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2971 Å
  • R-Value Free: 0.255 
  • R-Value Work: 0.201 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 334.108α = 90.00
b = 45.957β = 101.37
c = 78.947γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
PDB_EXTRACTdata extraction
HKL-2000data collection
HKL-2000data reduction
PHASERphasing
DENZOdata reduction
PHENIXrefinement
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots


View more in-depth experimental data

Entry History 

Deposition Data

  • Deposited Date: 2011-05-31 
  • Released Date: 2011-09-28 
  • Deposition Author(s): Bouyain, S.

Revision History 

  • Version 1.0: 2011-09-28
    Type: Initial release
  • Version 1.1: 2011-10-19
    Type: Database references
  • Version 1.2: 2011-11-02
    Type: Database references
  • Version 1.3: 2017-11-08
    Type: Refinement description