3LPS

Crystal structure of parE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.29 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.228 
  • R-Value Observed: 0.228 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of parE

Jung, H.Y.Heo, Y.-S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Topoisomerase IV subunit BA408Xanthomonas oryzae pv. oryzae KACC 10331Mutation(s): 0 
Gene Names: parEXOO2969
EC: 5.99.1.3 (PDB Primary Data), 5.6.2.2 (UniProt)
UniProt
Find proteins for Q5GYJ8 (Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85))
Explore Q5GYJ8 
Go to UniProtKB:  Q5GYJ8
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NOV (Subject of Investigation/LOI)
Query on NOV

Download Ideal Coordinates CCD File 
B [auth A]NOVOBIOCIN
C31 H36 N2 O11
YJQPYGGHQPGBLI-KGSXXDOSSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.29 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.228 
  • R-Value Observed: 0.228 
  • Space Group: P 42 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 105.12α = 90
b = 105.12β = 90
c = 135.969γ = 90
Software Package:
Software NamePurpose
HKL-2000data collection
CNSrefinement
HKL-2000data reduction
HKL-2000data scaling
CNSphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment  



Entry History 

Deposition Data

  • Deposited Date: 2010-02-05 
  • Released Date: 2011-02-16 
  • Deposition Author(s): Jung, H.Y., Heo, Y.-S.

Revision History  (Full details and data files)

  • Version 1.0: 2011-02-16
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance