3JXR

X-Ray structure of r[CGCG(5-fluoro)CG]2


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.276 
  • R-Value Work: 0.219 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The hydration and unusual hydrogen bonding in the crystal structure of an RNA duplex containing alternating CG base pairs

Adamiak, D.A.Milecki, J.Adamiak, R.W.Rypniewski, W.

(2010) New J.Chem. 34: 903-906


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
r[CGCG(5-fluoro)CG]2A,B,K6N/A
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
5CF
Query on 5CF
A, B, K
RNA LINKINGC9 H13 F N3 O8 P

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.276 
  • R-Value Work: 0.219 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 41.116α = 90.00
b = 41.116β = 90.00
c = 143.285γ = 120.00
Software Package:
Software NamePurpose
MAR345dtbdata collection
DENZOdata reduction
REFMACrefinement
MOLREPphasing
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-02-09
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2015-09-09
    Type: Refinement description