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X-Ray structure of r[CGCG(5-fluoro)CG]2
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 7 293 1.6M ammonium sulphate, 10mM magnesium chloride and 50mM HEPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 2.02 39.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 41.116 α = 90 b = 41.116 β = 90 c = 143.285 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MAR CCD 165 mm Si(111) 2002-03-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X13 0.8019 EMBL/DESY, HAMBURG X13
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.25 25 99.1 0.043 26 8.6 13169 13169 17
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.25 1.27 99.8 0.476 5.4 7.7 648
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.25 20 12702 253 100 0.21992 0.21992 0.21892 0.2282 0.27649 0.2809 RANDOM 21.27
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.17 0.09 0.17 -0.26
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 3.768 r_sphericity_bonded 3.308 r_scangle_it 3.119 r_scbond_it 2.44 r_angle_refined_deg 2.359 r_rigid_bond_restr 1.911 r_angle_other_deg 1.434 r_symmetry_hbond_refined 0.588 r_symmetry_vdw_other 0.324 r_nbd_other 0.278
RMS Deviations Key Refinement Restraint Deviation r_sphericity_free 3.768 r_sphericity_bonded 3.308 r_scangle_it 3.119 r_scbond_it 2.44 r_angle_refined_deg 2.359 r_rigid_bond_restr 1.911 r_angle_other_deg 1.434 r_symmetry_hbond_refined 0.588 r_symmetry_vdw_other 0.324 r_nbd_other 0.278 r_nbtor_refined 0.251 r_xyhbond_nbd_refined 0.206 r_symmetry_vdw_refined 0.148 r_chiral_restr 0.101 r_nbd_refined 0.1 r_nbtor_other 0.069 r_gen_planes_refined 0.021 r_bond_refined_d 0.018 r_gen_planes_other 0.015 r_bond_other_d 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms Nucleic Acid Atoms 381 Solvent Atoms 60 Heterogen Atoms
Software Software Software Name Purpose MAR345dtb data collection MOLREP phasing REFMAC refinement DENZO data reduction SCALEPACK data scaling