3J3Y

Atomic-level structure of the entire HIV-1 capsid (186 hexamers + 12 pentamers)

PDB DOI: https://doi.org/10.2210/pdb3J3Y/pdb
Entry: 3J3Y supersedes: 1VUU, 1VUV, 1VUW, 1VUX, 1VUY, 1VUZ, 1VV0, 1VV1, 1VV2, 1VV3, 1VV4, 1VV5, 1VV6, 1VV7, 1VV8, 1VV9, 1VVA, 1VVB, 1VVF, 1VVG, 1VVH, 1VVI
EM Map EMD-5639: EMDB EMDataResource

Classification: VIRUS
Organism(s): Human immunodeficiency virus 1
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2013-05-06 Released: 2013-05-29
Deposition Author(s): Perilla, J.R., Zhao, G., Zhang, P., Schulten, K.J.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Aggregation State: PARTICLE
Reconstruction Method: TOMOGRAPHY

wwPDB Validation 3D Report Full Report

Currently 3J3Y does not have a validation slider image.

This is version 1.4 of the entry. See complete history.

Literature

Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.

Zhao, G., Perilla, J.R., Yufenyuy, E.L., Meng, X., Chen, B., Ning, J., Ahn, J., Gronenborn, A.M., Schulten, K., Aiken, C., Zhang, P.

(2013) Nature 497: 643-646

PubMed: 23719463 Search on PubMedSearch on PubMed Central
DOI: https://doi.org/10.1038/nature12162
Primary Citation of Related Structures:
3J34, 3J3Q, 3J3Y, 3J4F

PubMed Abstract:
Retroviral capsid proteins are conserved structurally but assemble into different morphologies. The mature human immunodeficiency virus-1 (HIV-1) capsid is best described by a 'fullerene cone' model, in which hexamers of the capsid protein are linked to form a hexagonal surface lattice that is closed by incorporating 12 capsid-protein pentamers. HIV-1 capsid protein contains an amino-terminal domain (NTD) comprising seven α-helices and a β-hairpin, a carboxy-terminal domain (CTD) comprising four α-helices, and a flexible linker with a 310-helix connecting the two structural domains. Structures of the capsid-protein assembly units have been determined by X-ray crystallography; however, structural information regarding the assembled capsid and the contacts between the assembly units is incomplete. Here we report the cryo-electron microscopy structure of a tubular HIV-1 capsid-protein assembly at 8 Å resolution and the three-dimensional structure of a native HIV-1 core by cryo-electron tomography. The structure of the tubular assembly shows, at the three-fold interface, a three-helix bundle with critical hydrophobic interactions. Mutagenesis studies confirm that hydrophobic residues in the centre of the three-helix bundle are crucial for capsid assembly and stability, and for viral infectivity. The cryo-electron-microscopy structures enable modelling by large-scale molecular dynamics simulation, resulting in all-atom models for the hexamer-of-hexamer and pentamer-of-hexamer elements as well as for the entire capsid. Incorporation of pentamers results in closer trimer contacts and induces acute surface curvature. The complete atomic HIV-1 capsid model provides a platform for further studies of capsid function and for targeted pharmacological intervention.

Organizational Affiliation

Department of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15260, USA.

Macromolecule Content

Total Structure Weight: 30,226.13 kDa
Atom Count: 2,116,800
Modelled Residue Count: 271,656
Deposited Residue Count: 271,656
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
capsid protein	A [auth g8] AA [auth gw] AAA [auth a4] AB [auth gU] ABA [auth as] A [auth g8], AA [auth gw], AAA [auth a4], AB [auth gU], ABA [auth as], AC [auth hh], ACA [auth aP], AD [auth hF], ADA [auth bd], AE [auth i3], AEA [auth bB], AF [auth iq], AFA [auth bY], AG [auth iO], AGA [auth cm], AH [auth 28], AHA [auth 1g], AI [auth 2y], AIA [auth d7], AJ [auth 2Y], AJA [auth dv], AK [auth 3o], AKA [auth dS], AL [auth 3O], ALA [auth eg], AM [auth 4e], AMA [auth eE], AN [auth 4E], ANA [auth f1], AO [auth 54], AOA [auth fp], AP [auth 5u], APA [auth fN], AQ [auth 5U], AQA [auth b], AR [auth 6k], ARA [auth z], AS [auth 6K], ASA [auth X], AT [auth 7a], AU [auth 7A], AV [auth 80], AW [auth 8q], AX [auth 8Q], AY [auth 9g], AZ [auth 9G], B [auth g9], BA [auth gx], BAA [auth a5], BB [auth gV], BBA [auth at], BC [auth hi], BCA [auth aQ], BD [auth hG], BDA [auth be], BE [auth 1N], BEA [auth 19], BF [auth ir], BFA [auth bZ], BG [auth iP], BGA [auth cn], BH [auth 29], BHA [auth cK], BI [auth 2z], BIA [auth d8], BJ [auth 2Z], BJA [auth dw], BK [auth 3p], BKA [auth dT], BL [auth 3P], BLA [auth eh], BM [auth 4f], BMA [auth eF], BN [auth 4F], BNA [auth f2], BO [auth 55], BOA [auth fq], BP [auth 5v], BPA [auth 1z], BQ [auth 5V], BQA [auth c], BR [auth 6l], BRA [auth A], BS [auth 6L], BSA [auth 5], BT [auth 7b], BU [auth 7B], BV [auth 81], BW [auth 8r], BX [auth 8R], BY [auth 9h], BZ [auth 9H], C [auth ga], CA [auth gy], CAA [auth a6], CB [auth 1G], CBA [auth 12], CC [auth hj], CCA [auth aR], CD [auth hH], CDA [auth bf], CE [auth i4], CEA [auth bC], CF [auth is], CFA [auth c0], CG [auth iQ], CGA [auth co], CH [auth 2a], CHA [auth cL], CI [auth 2A], CIA [auth d9], CJ [auth 30], CJA [auth dx], CK [auth 3q], CKA [auth dU], CL [auth 3Q], CLA [auth ei], CM [auth 4g], CMA [auth 1s], CN [auth 4G], CNA [auth f3], CO [auth 56], COA [auth fr], CP [auth 5w], CPA [auth fO], CQ [auth 5W], CQA [auth d], CR [auth 6m], CRA [auth B], CS [auth 6M], CSA [auth 6], CT [auth 7c], CU [auth 7C], CV [auth 82], CW [auth 8s], CX [auth 8S], CY [auth 9i], CZ [auth 9I], D [auth gb], DA [auth gz], DAA [auth a7], DB [auth gW], DBA [auth au], DC [auth hk], DCA [auth aS], DD [auth hI], DDA [auth bg], DE [auth i5], DEA [auth bD], DF [auth it], DFA [auth c1], DG [auth iR], DGA [auth cp], DH [auth 2b], DHA [auth cM], DI [auth 2B], DIA [auth da], DJ [auth 31], DJA [auth 1l], DK [auth 3r], DKA [auth dV], DL [auth 3R], DLA [auth ej], DM [auth 4h], DMA [auth eG], DN [auth 4H], DNA [auth f4], DO [auth 57], DOA [auth fs], DP [auth 5x], DPA [auth fP], DQ [auth 5X], DQA [auth e], DR [auth 6n], DRA [auth C], DS [auth 6N], DSA [auth 7], DT [auth 7d], DU [auth 7D], DV [auth 83], DW [auth 8t], DX [auth 8T], DY [auth 9j], DZ [auth 9J], E [auth gc], EA [auth gA], EAA [auth a8], EB [auth gX], EBA [auth av], EC [auth hl], ECA [auth aT], ED [auth hJ], EDA [auth bh], EE [auth i6], EEA [auth bE], EF [auth iu], EFA [auth c2], EG [auth 1S], EGA [auth 1e], EH [auth 2c], EHA [auth cN], EI [auth 2C], EIA [auth db], EJ [auth 32], EJA [auth dy], EK [auth 3s], EKA [auth dW], EL [auth 3S], ELA [auth ek], EM [auth 4i], EMA [auth eH], EN [auth 4I], ENA [auth f5], EO [auth 58], EOA [auth ft], EP [auth 5y], EPA [auth fQ], EQ [auth 5Y], EQA [auth f], ER [auth 6o], ERA [auth D], ES [auth 6O], ESA [auth 8], ET [auth 7e], EU [auth 7E], EV [auth 84], EW [auth 8u], EX [auth 8U], EY [auth 9k], EZ [auth 9K], F [auth gd], FA [auth gB], FAA [auth a9], FB [auth gY], FBA [auth aw], FC [auth hm], FCA [auth aU], FD [auth 1L], FDA [auth 17], FE [auth i7], FEA [auth bF], FF [auth iv], FFA [auth c3], FG [auth iS], FGA [auth cq], FH [auth 2d], FHA [auth cO], FI [auth 2D], FIA [auth dc], FJ [auth 33], FJA [auth dz], FK [auth 3t], FKA [auth dX], FL [auth 3T], FLA [auth el], FM [auth 4j], FMA [auth eI], FN [auth 4J], FNA [auth f6], FO [auth 59], FOA [auth 1x], FP [auth 5z], FPA [auth fR], FQ [auth 5Z], FQA [auth g], FR [auth 6p], FRA [auth 3], FS [auth 6P], FSA [auth 9], FT [auth 7f], FU [auth 7F], FV [auth 85], FW [auth 8v], FX [auth 8V], FY [auth 9l], FZ [auth 9L], G [auth ge], GA [auth 1E], GAA [auth 10], GB [auth gZ], GBA [auth ax], GC [auth hn], GCA [auth aV], GD [auth hK], GDA [auth bi], GE [auth i8], GEA [auth bG], GF [auth iw], GFA [auth c4], GG [auth iT], GGA [auth cr], GH [auth 2e], GHA [auth cP], GI [auth 2E], GIA [auth dd], GJ [auth 34], GJA [auth dA], GK [auth 3u], GKA [auth dY], GL [auth 3U], GLA [auth 1q], GM [auth 4k], GMA [auth eJ], GN [auth 4K], GNA [auth f7], GO [auth 5a], GOA [auth fu], GP [auth 5A], GPA [auth fS], GQ [auth 60], GQA [auth h], GR [auth 6q], GRA [auth E], GS [auth 6Q], GT [auth 7g], GU [auth 7G], GV [auth 86], GW [auth 8w], GX [auth 8W], GY [auth 9m], GZ [auth 9M], H [auth gf], HA [auth gC], HAA [auth aa], HB [auth h0], HBA [auth ay], HC [auth ho], HCA [auth aW], HD [auth hL], HDA [auth bj], HE [auth i9], HEA [auth bH], HF [auth ix], HFA [auth c5], HG [auth iU], HGA [auth cs], HH [auth 2f], HHA [auth cQ], HI [auth 2F], HIA [auth 1j], HJ [auth 35], HJA [auth dB], HK [auth 3v], HKA [auth dZ], HL [auth 3V], HLA [auth em], HM [auth 4l], HMA [auth eK], HN [auth 4L], HNA [auth f8], HO [auth 5b], HOA [auth fv], HP [auth 5B], HPA [auth fT], HQ [auth 61], HQA [auth i], HR [auth 6r], HRA [auth F], HS [auth 6R], HT [auth 7h], HU [auth 7H], HV [auth 87], HW [auth 8x], HX [auth 8X], HY [auth 9n], HZ [auth 9N], I [auth gg], IA [auth gD], IAA [auth ab], IB [auth h1], IBA [auth az], IC [auth hp], ICA [auth aX], ID [auth hM], IDA [auth bk], IE [auth ia], IEA [auth bI], IF [auth 1Q], IFA [auth 1c], IG [auth iV], IGA [auth ct], IH [auth 2g], IHA [auth cR], II [auth 2G], IIA [auth de], IJ [auth 36], IJA [auth dC], IK [auth 3w], IKA [auth e0], IL [auth 3W], ILA [auth en], IM [auth 4m], IMA [auth eL], IN [auth 4M], INA [auth f9], IO [auth 5c], IOA [auth fw], IP [auth 5C], IPA [auth fU], IQ [auth 62], IQA [auth j], IR [auth 6s], IRA [auth G], IS [auth 6S], IT [auth 7i], IU [auth 7I], IV [auth 88], IW [auth 8y], IX [auth 8Y], IY [auth 9o], IZ [auth 9O], J [auth gh], JA [auth gE], JAA [auth ac], JB [auth h2], JBA [auth aA], JC [auth 1J], JCA [auth 15], JD [auth hN], JDA [auth bl], JE [auth ib], JEA [auth bJ], JF [auth iy], JFA [auth c6], JG [auth iW], JGA [auth cu], JH [auth 2h], JHA [auth cS], JI [auth 2H], JIA [auth df], JJ [auth 37], JJA [auth dD], JK [auth 3x], JKA [auth e1], JL [auth 3X], JLA [auth eo], JM [auth 4n], JMA [auth eM], JN [auth 4N], JNA [auth 1v], JO [auth 5d], JOA [auth fx], JP [auth 5D], JPA [auth fV], JQ [auth 63], JQA [auth 1], JR [auth 6t], JRA [auth H], JS [auth 6T], JT [auth 7j], JU [auth 7J], JV [auth 89], JW [auth 8z], JX [auth 8Z], JY [auth 9p], JZ [auth 9P], K [auth 1C], KA [auth gF], KAA [auth ad], KB [auth h3], KBA [auth aB], KC [auth hq], KCA [auth aY], KD [auth hO], KDA [auth bm], KE [auth ic], KEA [auth bK], KF [auth iz], KFA [auth c7], KG [auth iX], KGA [auth cv], KH [auth 2i], KHA [auth cT], KI [auth 2I], KIA [auth dg], KJ [auth 38], KJA [auth dE], KK [auth 3y], KKA [auth 1o], KL [auth 3Y], KLA [auth ep], KM [auth 4o], KMA [auth eN], KN [auth 4O], KNA [auth fa], KO [auth 5e], KOA [auth fy], KP [auth 5E], KPA [auth fW], KQ [auth 64], KQA [auth k], KR [auth 6u], KRA [auth I], KS [auth 6U], KT [auth 7k], KU [auth 7K], KV [auth 8a], KW [auth 8A], KX [auth 90], KY [auth 9q], KZ [auth Y], L [auth gi], LA [auth gG], LAA [auth ae], LB [auth h4], LBA [auth aC], LC [auth hr], LCA [auth aZ], LD [auth hP], LDA [auth bn], LE [auth id], LEA [auth bL], LF [auth iA], LFA [auth c8], LG [auth 1T], LGA [auth cw], LH [auth 2j], LHA [auth 1h], LI [auth 2J], LIA [auth dh], LJ [auth 39], LJA [auth dF], LK [auth 3z], LKA [auth e2], LL [auth 3Z], LLA [auth eq], LM [auth 4p], LMA [auth eO], LN [auth 4P], LNA [auth fb], LO [auth 5f], LOA [auth fz], LP [auth 5F], LPA [auth fX], LQ [auth 65], LQA [auth l], LR [auth 6v], LRA [auth J], LS [auth 6V], LT [auth 7l], LU [auth 7L], LV [auth 8b], LW [auth 8B], LX [auth 91], LY [auth 9r], LZ [auth 9Q], M [auth gj], MA [auth gH], MAA [auth af], MB [auth h5], MBA [auth aD], MC [auth hs], MCA [auth b0], MD [auth hQ], MDA [auth bo], ME [auth 1O], MEA [auth 1a], MF [auth iB], MFA [auth c9], MG [auth 1U], MGA [auth cx], MH [auth 2k], MHA [auth cU], MI [auth 2K], MIA [auth di], MJ [auth 3a], MJA [auth dG], MK [auth 3A], MKA [auth e3], ML [auth 40], MLA [auth er], MM [auth 4q], MMA [auth eP], MN [auth 4Q], MNA [auth fc], MO [auth 5g], MOA [auth fA], MP [auth 5G], MPA [auth 1A], MQ [auth 66], MQA [auth m], MR [auth 6w], MRA [auth K], MS [auth 6W], MT [auth 7m], MU [auth 7M], MV [auth 8c], MW [auth 8C], MX [auth 92], MY [auth 9s], MZ [auth 9R], N [auth gk], NA [auth gI], NAA [auth ag], NB [auth 1H], NBA [auth 13], NC [auth ht], NCA [auth b1], ND [auth hR], NDA [auth bp], NE [auth ie], NEA [auth bM], NF [auth iC], NFA [auth ca], NG [auth 1V], NGA [auth cy], NH [auth 2l], NHA [auth cV], NI [auth 2L], NIA [auth dj], NJ [auth 3b], NJA [auth dH], NK [auth 3B], NKA [auth e4], NL [auth 41], NLA [auth es], NM [auth 4r], NMA [auth 1t], NN [auth 4R], NNA [auth fd], NO [auth 5h], NOA [auth fB], NP [auth 5H], NPA [auth fY], NQ [auth 67], NQA [auth n], NR [auth 6x], NRA [auth L], NS [auth 6X], NT [auth 7n], NU [auth 7N], NV [auth 8d], NW [auth 8D], NX [auth 93], NY [auth 9t], NZ [auth 9S], O [auth gl], OA [auth gJ], OAA [auth ah], OB [auth h6], OBA [auth aE], OC [auth hu], OCA [auth b2], OD [auth hS], ODA [auth bq], OE [auth if], OEA [auth bN], OF [auth iD], OFA [auth cb], OG [auth 1W], OGA [auth cz], OH [auth 2m], OHA [auth cW], OI [auth 2M], OIA [auth dk], OJ [auth 3c], OJA [auth 1m], OK [auth 3C], OKA [auth e5], OL [auth 42], OLA [auth et], OM [auth 4s], OMA [auth eQ], ON [auth 4S], ONA [auth fe], OO [auth 5i], OOA [auth fC], OP [auth 5I], OPA [auth fZ], OQ [auth 68], OQA [auth o], OR [auth 6y], ORA [auth M], OS [auth 6Y], OT [auth 7o], OU [auth 7O], OV [auth 8e], OW [auth 8E], OX [auth 94], OY [auth 9u], OZ [auth 9T], P [auth gm], PA [auth gK], PAA [auth ai], PB [auth h7], PBA [auth aF], PC [auth hv], PCA [auth b3], PD [auth hT], PDA [auth br], PE [auth ig], PEA [auth bO], PF [auth iE], PFA [auth cc], PG [auth 1X], PGA [auth 1f], PH [auth 2n], PHA [auth cX], PI [auth 2N], PIA [auth dl], PJ [auth 3d], PJA [auth dI], PK [auth 3D], PKA [auth e6], PL [auth 43], PLA [auth eu], PM [auth 4t], PMA [auth eR], PN [auth 4T], PNA [auth ff], PO [auth 5j], POA [auth fD], PP [auth 5J], PPA [auth g0], PQ [auth 69], PQA [auth p], PR [auth 6z], PRA [auth N], PS [auth 6Z], PT [auth 7p], PU [auth 7P], PV [auth 8f], PW [auth 8F], PX [auth 95], PY [auth 9v], PZ [auth 9U], Q [auth gn], QA [auth gL], QAA [auth aj], QB [auth h8], QBA [auth aG], QC [auth hw], QCA [auth b4], QD [auth 1M], QDA [auth 18], QE [auth ih], QEA [auth bP], QF [auth iF], QFA [auth cd], QG [auth 1Y], QGA [auth cA], QH [auth 2o], QHA [auth cY], QI [auth 2O], QIA [auth dm], QJ [auth 3e], QJA [auth dJ], QK [auth 3E], QKA [auth e7], QL [auth 44], QLA [auth ev], QM [auth 4u], QMA [auth eS], QN [auth 4U], QNA [auth fg], QO [auth 5k], QOA [auth 1y], QP [auth 5K], QPA [auth g1], QQ [auth 6a], QQA [auth q], QR [auth 6A], QRA [auth 4], QS [auth 70], QT [auth 7q], QU [auth 7Q], QV [auth 8g], QW [auth 8G], QX [auth 96], QY [auth 9w], QZ [auth 9V], R [auth go], RA [auth 1F], RAA [auth 11], RB [auth h9], RBA [auth aH], RC [auth hx], RCA [auth b5], RD [auth hU], RDA [auth bs], RE [auth ii], REA [auth bQ], RF [auth iG], RFA [auth ce], RG [auth 1Z], RGA [auth cB], RH [auth 2p], RHA [auth cZ], RI [auth 2P], RIA [auth dn], RJ [auth 3f], RJA [auth dK], RK [auth 3F], RKA [auth e8], RL [auth 45], RLA [auth 1r], RM [auth 4v], RMA [auth eT], RN [auth 4V], RNA [auth fh], RO [auth 5l], ROA [auth fE], RP [auth 5L], RPA [auth g2], RQ [auth 6b], RQA [auth r], RR [auth 6B], RRA [auth O], RS [auth 71], RT [auth 7r], RU [auth 7R], RV [auth 8h], RW [auth 8H], RX [auth 97], RY [auth 9x], RZ [auth 9W], S [auth gp], SA [auth gM], SAA [auth ak], SB [auth ha], SBA [auth aI], SC [auth hy], SCA [auth b6], SD [auth hV], SDA [auth bt], SE [auth ij], SEA [auth bR], SF [auth iH], SFA [auth cf], SG [auth 20], SGA [auth cC], SH [auth 2q], SHA [auth d0], SI [auth 2Q], SIA [auth 1k], SJ [auth 3g], SJA [auth dL], SK [auth 3G], SKA [auth e9], SL [auth 46], SLA [auth ew], SM [auth 4w], SMA [auth eU], SN [auth 4W], SNA [auth fi], SO [auth 5m], SOA [auth fF], SP [auth 5M], SPA [auth g3], SQ [auth 6c], SQA [auth s], SR [auth 6C], SRA [auth P], SS [auth 72], ST [auth 7s], SU [auth 7S], SV [auth 8i], SW [auth 8I], SX [auth 98], SY [auth 9y], SZ [auth 9X], T [auth gq], TA [auth gN], TAA [auth al], TB [auth hb], TBA [auth aJ], TC [auth hz], TCA [auth b7], TD [auth hW], TDA [auth bu], TE [auth ik], TEA [auth bS], TF [auth 1R], TFA [auth 1d], TG [auth 21], TGA [auth cD], TH [auth 2r], THA [auth d1], TI [auth 2R], TIA [auth do], TJ [auth 3h], TJA [auth dM], TK [auth 3H], TKA [auth ea], TL [auth 47], TLA [auth ex], TM [auth 4x], TMA [auth eV], TN [auth 4X], TNA [auth fj], TO [auth 5n], TOA [auth fG], TP [auth 5N], TPA [auth g4], TQ [auth 6d], TQA [auth t], TR [auth 6D], TRA [auth Q], TS [auth 73], TT [auth 7t], TU [auth 7T], TV [auth 8j], TW [auth 8J], TX [auth 99], TY [auth 9z], TZ [auth 9Y], U [auth gr], UA [auth gO], UAA [auth am], UB [auth hc], UBA [auth aK], UC [auth 1K], UCA [auth 16], UD [auth hX], UDA [auth bv], UE [auth il], UEA [auth bT], UF [auth iI], UFA [auth cg], UG [auth 22], UGA [auth cE], UH [auth 2s], UHA [auth d2], UI [auth 2S], UIA [auth dp], UJ [auth 3i], UJA [auth dN], UK [auth 3I], UKA [auth eb], UL [auth 48], ULA [auth ey], UM [auth 4y], UMA [auth eW], UN [auth 4Y], UNA [auth 1w], UO [auth 5o], UOA [auth fH], UP [auth 5O], UPA [auth g5], UQ [auth 6e], UQA [auth 2], UR [auth 6E], URA [auth R], US [auth 74], UT [auth 7u], UU [auth 7U], UV [auth 8k], UW [auth 8K], UX [auth 9a], UY [auth 9A], UZ [auth 9Z], V [auth 1D], VA [auth gP], VAA [auth an], VB [auth hd], VBA [auth aL], VC [auth hA], VCA [auth b8], VD [auth hY], VDA [auth bw], VE [auth im], VEA [auth bU], VF [auth iJ], VFA [auth ch], VG [auth 23], VGA [auth cF], VH [auth 2t], VHA [auth d3], VI [auth 2T], VIA [auth dq], VJ [auth 3j], VJA [auth dO], VK [auth 3J], VKA [auth 1p], VL [auth 49], VLA [auth ez], VM [auth 4z], VMA [auth eX], VN [auth 4Z], VNA [auth fk], VO [auth 5p], VOA [auth fI], VP [auth 5P], VPA [auth g6], VQ [auth 6f], VQA [auth u], VR [auth 6F], VRA [auth S], VS [auth 75], VT [auth 7v], VU [auth 7V], VV [auth 8l], VW [auth 8L], VX [auth 9b], VY [auth 9B], VZ [auth Z], W [auth gs], WA [auth gQ], WAA [auth ao], WB [auth he], WBA [auth aM], WC [auth hB], WCA [auth b9], WD [auth hZ], WDA [auth bx], WE [auth in], WEA [auth bV], WF [auth iK], WFA [auth ci], WG [auth 24], WGA [auth cG], WH [auth 2u], WHA [auth 1i], WI [auth 2U], WIA [auth dr], WJ [auth 3k], WJA [auth dP], WK [auth 3K], WKA [auth ec], WL [auth 4a], WLA [auth eA], WM [auth 4A], WMA [auth eY], WN [auth 50], WNA [auth fl], WO [auth 5q], WOA [auth fJ], WP [auth 5Q], WPA [auth g7], WQ [auth 6g], WQA [auth v], WR [auth 6G], WRA [auth T], WS [auth 76], WT [auth 7w], WU [auth 7W], WV [auth 8m], WW [auth 8M], WX [auth 9c], WY [auth 9C], WZ [auth a0], X [auth gt], XA [auth gR], XAA [auth ap], XB [auth hf], XBA [auth aN], XC [auth hC], XCA [auth ba], XD [auth i0], XDA [auth by], XE [auth 1P], XEA [auth 1b], XF [auth iL], XFA [auth cj], XG [auth 25], XGA [auth cH], XH [auth 2v], XHA [auth d4], XI [auth 2V], XIA [auth ds], XJ [auth 3l], XJA [auth dQ], XK [auth 3L], XKA [auth ed], XL [auth 4b], XLA [auth eB], XM [auth 4B], XMA [auth eZ], XN [auth 51], XNA [auth fm], XO [auth 5r], XOA [auth fK], XP [auth 5R], XPA [auth 1B], XQ [auth 6h], XQA [auth w], XR [auth 6H], XRA [auth U], XS [auth 77], XT [auth 7x], XU [auth 7X], XV [auth 8n], XW [auth 8N], XX [auth 9d], XY [auth 9D], XZ [auth a1], Y [auth gu], YA [auth gS], YAA [auth aq], YB [auth 1I], YBA [auth 14], YC [auth hD], YCA [auth bb], YD [auth i1], YDA [auth bz], YE [auth io], YEA [auth bW], YF [auth iM], YFA [auth ck], YG [auth 26], YGA [auth cI], YH [auth 2w], YHA [auth d5], YI [auth 2W], YIA [auth dt], YJ [auth 3m], YJA [auth dR], YK [auth 3M], YKA [auth ee], YL [auth 4c], YLA [auth eC], YM [auth 4C], YMA [auth 1u], YN [auth 52], YNA [auth fn], YO [auth 5s], YOA [auth fL], YP [auth 5S], YPA [auth 0], YQ [auth 6i], YQA [auth x], YR [auth 6I], YRA [auth V], YS [auth 78], YT [auth 7y], YU [auth 7Y], YV [auth 8o], YW [auth 8O], YX [auth 9e], YY [auth 9E], YZ [auth a2], Z [auth gv], ZA [auth gT], ZAA [auth ar], ZB [auth hg], ZBA [auth aO], ZC [auth hE], ZCA [auth bc], ZD [auth i2], ZDA [auth bA], ZE [auth ip], ZEA [auth bX], ZF [auth iN], ZFA [auth cl], ZG [auth 27], ZGA [auth cJ], ZH [auth 2x], ZHA [auth d6], ZI [auth 2X], ZIA [auth du], ZJ [auth 3n], ZJA [auth 1n], ZK [auth 3N], ZKA [auth ef], ZL [auth 4d], ZLA [auth eD], ZM [auth 4D], ZMA [auth f0], ZN [auth 53], ZNA [auth fo], ZO [auth 5t], ZOA [auth fM], ZP [auth 5T], ZPA [auth a], ZQ [auth 6j], ZQA [auth y], ZR [auth 6J], ZRA [auth W], ZS [auth 79], ZT [auth 7z], ZU [auth 7Z], ZV [auth 8p], ZW [auth 8P], ZX [auth 9f], ZY [auth 9F], ZZ [auth a3]	231	Human immunodeficiency virus 1	Mutation(s): 1 Gene Names: gag
UniProt
Find proteins for Q79791 (Human immunodeficiency virus 1) Explore Q79791 Go to UniProtKB: Q79791
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q79791
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Reference Sequence