3HSC

THREE-DIMENSIONAL STRUCTURE OF THE ATPASE FRAGMENT OF A 70K HEAT-SHOCK COGNATE PROTEIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Work: 0.210 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Three-dimensional structure of the ATPase fragment of a 70K heat-shock cognate protein.

Flaherty, K.M.DeLuca-Flaherty, C.McKay, D.B.

(1990) Nature 346: 623-628

  • DOI: 10.1038/346623a0

  • PubMed Abstract: 
  • The three-dimensional structure of the amino-terminal 44K ATPase fragment of the 70K bovine heat-shock cognate protein has been solved to a resolution of 2.2 A. The ATPase fragment has two structural lobes with a deep cleft between them; ATP binds at ...

    The three-dimensional structure of the amino-terminal 44K ATPase fragment of the 70K bovine heat-shock cognate protein has been solved to a resolution of 2.2 A. The ATPase fragment has two structural lobes with a deep cleft between them; ATP binds at the base of the cleft. Surprisingly, the nucleotide-binding 'core' of the ATPase fragment has a tertiary structure similar to that of hexokinase, although the remainder of the structures of the two proteins are completely dissimilar, suggesting that both the phosphotransferase mechanism and the substrate-induced conformational change intrinsic to the hexokinases may be used by the 70K heat shock-related proteins.


    Related Citations: 
    • How Potassium Affects the Activity of the Molecular Chaperone Hsc70 II. Potassium Binds Specifically in the ATPase Active Site
      Wilbanks, S.M.,Mckay, D.B.
      (1995) J.Biol.Chem. 270: 2251
    • How Potassium Affects the Activity of the Molecular Chaperone Hsc70 I. Potassium is Required for Optimal ATPase Activity
      O'Brien, M.C.,Mckay, D.B.
      (1995) J.Biol.Chem. 270: 2247
    • Structural Basis of the 70-Kilodalton Heat Shock Cognate Protein ATP Hydrolytic Activity, II. Structure of the Active Site with Adp or ATP Bound to Wild Type and Mutant ATPase Fragment
      Flaherty, K.M.,Wilbanks, S.M.,Deluca-Flaherty, C.,Mckay, D.B.
      (1994) J.Biol.Chem. 269: 12899


    Organizational Affiliation

    Beckman Laboratories for Structural Biology, Department of Cell Biology, Stanford University School of Medicine, California 94305-5400.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
HEAT-SHOCK COGNATE 7OKD PROTEIN
A
386Bos taurusMutation(s): 0 
Gene Names: HSPA8 (HSC70)
Find proteins for P19120 (Bos taurus)
Go to Gene View: HSPA8
Go to UniProtKB:  P19120
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
NA
Query on NA

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Download CCD File 
A
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
ADP
Query on ADP

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Download CCD File 
A
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
ADPIC50: 280 nM (100) BINDINGDB
ADPKd: 320 - 324 nM (100) BINDINGDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Work: 0.210 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 145.300α = 90.00
b = 65.000β = 90.00
c = 46.900γ = 90.00
Software Package:
Software NamePurpose
X-PLORphasing
X-PLORmodel building
X-PLORrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1995-07-10
    Type: Initial release
  • Version 1.1: 2008-03-25
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance