Download Mendeley
Download EndnoteCrystal structure of NTF2-like protein of unknown function (NP_107719.1) from Mesorhizobium loti at 1.96 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
3HK4
CRYSTAL STRUCTURE OF A PUTATIVE SNOAL-LIKE POLYKETIDE CYCLASE [CARBOHYDRATE PHOSPHATASE] (MLR7391) FROM MESORHIZOBIUM LOTI AT 1.96 A RESOLUTION
- DOI: 10.2210/pdb3HK4/pdb
- Classification: LYASE
- Organism(s): Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
- Expression System: Escherichia coli
- Deposited: 2009-05-22 Released: 2009-06-09
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.96 Å
- R-Value Free: 0.220
- R-Value Work: 0.177
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Mlr7391 protein | A, B, C, D | 136 | Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) | Mutation(s): 0 |
Find proteins for Q986E8 (Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)) Go to UniProtKB: Q986E8 | ||||
Small Molecules
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.96 Å
- R-Value Free: 0.220
- R-Value Work: 0.177
- Space Group: P 1
- Diffraction Data DOI:
10.18430/M33HK4 Protein Diffraction
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 42.183 | α = 88.77 |
| b = 54.778 | β = 84.91 |
| c = 63.844 | γ = 73.56 |
| Software Name | Purpose |
|---|---|
| autoSHARP | phasing |
| MolProbity | model building |
| SHELX | phasing |
| XSCALE | data scaling |
| XDS | data reduction |
| REFMAC | refinement |
| PHENIX | refinement |
| SHELXD | phasing |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Deposited Date: 2009-05-22
- Released Date: 2009-06-09
- Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History
- Version 1.0: 2009-06-09
Type: Initial release - Version 1.1: 2011-07-13
Type: Advisory, Version format compliance - Version 1.2: 2017-10-25
Type: Author supporting evidence, Refinement description
