3HJD

X-ray structure of monomeric variant of HNP1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.174 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

What Dictates the Multifaced Functions of the Human alpha-Defensin HNP?

Wei, G.de Leeuw, E.Pazgier, M.Rajabi, M.Li, J.Zou, G.Ericksen, B.Wu, Z.Yuan, W.Szmacinski, H.Lu, W.-Y.Lubkowski, J.Lehrer, R.L.Lu, W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Human neutrophil peptide 1
A, B
30Homo sapiensMutation(s): 0 
Gene Names: DEFA1, DEFA1B (DEF1, DEFA2, MRS)
Find proteins for P59665 (Homo sapiens)
Go to Gene View: DEFA1 DEFA1B
Go to UniProtKB:  P59665
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
IML
Query on IML
A, B
L-PEPTIDE LINKINGC7 H15 N O2ILE
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.174 
  • Space Group: P 6 2 2
Unit Cell:
Length (Å)Angle (°)
a = 69.850α = 90.00
b = 69.850β = 90.00
c = 46.330γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
HKL-2000data reduction
HKL-2000data collection
REFMACrefinement
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-10-13
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2011-09-07
    Type: Advisory
  • Version 1.3: 2018-01-24
    Type: Database references