3E2Z

Crystal structure of mouse kynurenine aminotransferase III in complex with kynurenine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.81 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Correction for Han et al., "Biochemical and Structural Properties of Mouse Kynurenine Aminotransferase III".

Han, Q.Robinson, H.Cai, T.Tagle, D.A.Li, J.

(2018) Mol. Cell. Biol. 38: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Kynurenine-oxoglutarate transaminase 3
A
410Mus musculusMutation(s): 0 
Gene Names: Kyat3 (Ccbl2, Kat3)
EC: 2.6.1.7
Find proteins for Q71RI9 (Mus musculus)
Go to UniProtKB:  Q71RI9
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Kynurenine-oxoglutarate transaminase 3
B
410Mus musculusMutation(s): 0 
Gene Names: Kyat3 (Ccbl2, Kat3)
EC: 2.6.1.7
Find proteins for Q71RI9 (Mus musculus)
Go to UniProtKB:  Q71RI9
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
KYN
Query on KYN

Download SDF File 
Download CCD File 
A, B
(2S)-2-amino-4-(2-aminophenyl)-4-oxobutanoic acid
L-KYNURENINE
C10 H12 N2 O3
YGPSJZOEDVAXAB-QMMMGPOBSA-N
 Ligand Interaction
GOL
Query on GOL

Download SDF File 
Download CCD File 
A, B
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
PMP
Query on PMP

Download SDF File 
Download CCD File 
B
4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
PYRIDOXAMINE-5'-PHOSPHATE
C8 H13 N2 O5 P
ZMJGSOSNSPKHNH-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
LLP
Query on LLP
A
L-PEPTIDE LINKINGC14 H22 N3 O7 PLYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.81 Å
  • R-Value Free: 0.237 
  • R-Value Work: 0.192 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 91.490α = 90.00
b = 91.490β = 90.00
c = 233.501γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data collection
SCALAdata scaling
REFMACrefinement
DENZOdata reduction
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-12-30
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Non-polymer description, Version format compliance
  • Version 1.2: 2018-08-01
    Type: Advisory, Data collection, Database references