3DML

Crystal structure of the periplasmic thioredoxin SoxS from Paracoccus pantotrophus (reduced form)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.154 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of the periplasmic thioredoxin SoxS from Paracoccus pantotrophus indicates a dual Trx/Grx functionality for activation of chemotrophic sulfur oxidation in vivo

Carius, Y.Rother, D.Friedrich, C.G.Scheidig, A.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Putative uncharacterized protein
A
116Paracoccus denitrificansMutation(s): 0 
Find proteins for Q8KM22 (Paracoccus denitrificans)
Go to UniProtKB:  Q8KM22
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.154 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 80.909α = 90.00
b = 80.909β = 90.00
c = 33.212γ = 120.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
Auto-Rickshawphasing
MAR345data collection
DENZOdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-08-26
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description