3DLX

Crystal structure of human 3-oxoacid CoA transferase 1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.178 
  • R-Value Observed: 0.179 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal structure of human 3-oxoacid CoA transferase 1.

Kavanagh, K.L.Shafqat, N.Yue, W.W.Picaud, S.Murray, J.W.Maclean, E.M.von Delft, F.Roos, A.K.Arrowsmith, C.H.Wikstrom, M.Edwards, A.M.Bountra, C.Oppermann, U.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Succinyl-CoA:3-ketoacid-coenzyme A transferase 1A, B, C, D489Homo sapiensMutation(s): 0 
Gene Names: OXCT1OXCTSCOT
EC: 2.8.3.5
UniProt & NIH Common Fund Data Resources
Find proteins for P55809 (Homo sapiens)
Explore P55809 
Go to UniProtKB:  P55809
PHAROS:  P55809
GTEx:  ENSG00000083720 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP55809
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download Ideal Coordinates CCD File 
E [auth A],
F [auth C]
GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.225 
  • R-Value Work: 0.178 
  • R-Value Observed: 0.179 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 60.956α = 90
b = 168.492β = 105.86
c = 95.322γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MAR345data collection
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View Full Validation Report




Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2008-08-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Version format compliance
  • Version 1.2: 2017-10-25
    Changes: Refinement description