2IG2

DIR PRIMAERSTRUKTUR DES KRISTALLISIERBAREN MONOKLONALEN IMMUNOGLOBULINS IGG1 KOL. II. AMINOSAEURESEQUENZ DER L-KETTE, LAMBDA-TYP, SUBGRUPPE I (GERMAN)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Work: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

The primary structure of crystallizable monoclonal immunoglobulin IgG1 Kol. II. Amino acid sequence of the L-chain, gamma-type, subgroup I

Kratzin, H.D.Palm, W.Stangel, M.Schmidt, W.E.Friedrich, J.Hilschmann, N.

(1989) Biol Chem Hoppe Seyler 370: 263-272

  • Primary Citation of Related Structures:  
    2IG2, 2FB4

  • PubMed Abstract: 
  • The immunoglobulin Kol was the first intact antibody molecule which was characterized by high-resolution X-ray crystallography. Furthermore the complete amino-acid sequence of the heavy (H)-chain is known. Here we report the complete amino-acid seque ...

    The immunoglobulin Kol was the first intact antibody molecule which was characterized by high-resolution X-ray crystallography. Furthermore the complete amino-acid sequence of the heavy (H)-chain is known. Here we report the complete amino-acid sequence of the light (L)-chain of the monoclonal immunoglobulin Kol (IgG1). The polypeptide has an Mr of 22,781, consists of 216 amino acids and due to its structure is of the lambda-type. With the characteristic amino acids threonine, asparagine, threonine, glycine and lysine in positions 101, 114, 116, 154, and 165, respectively the Kol L-chain is of the Mcg isotype. With the proteins Mcg, Mot, Bur, Loc and Mem six myeloma-derived amino-acid sequences of the same isotype are known. The amino-acid sequence of the N-terminal variable part is characteristic of subgroup 1. This contribution completes the primary structure of IgG1 Kol.


    Related Citations: 
    • The Three-Dimensional Structure of Antibodies
      Marquart, M., Deisenhofer, J.
      (1982) Immunol Today 3: 160
    • Crystallographic Refinement and Atomic Models of the Intact Immunoglobulin Molecule Kol and its Antigen-Binding Fragment at 3.0 Angstroms and 1.9 Angstroms Resolution
      Marquart, M., Deisenhofer, J., Huber, R., Palm, W.
      (1980) J Mol Biol 141: 369
    • Crystal Structure of the Human Fab Fragment Kol and its Comparison with the Intact Kol Molecule
      Matsushima, M., Marquart, M., Jones, T.A., Colman, P.M., Bartels, K., Huber, R.
      (1978) J Mol Biol 121: 441
    • Crystallographic Structure Studies of an Igg Molecule and an Fc Fragment
      Huber, R., Deisenhofer, J., Colman, P.M., Matsushima, M., Palm, W.
      (1976) Nature 264: 415
    • Structure of the Human Antibody Molecule Kol (Immunoglobulin G1). An Electron Density Map at 5 Angstroms Resolution
      Colman, P.M., Deisenhofer, J., Huber, R., Palm, W.
      (1976) J Mol Biol 100: 257

    Organizational Affiliation

    max-Planck-Institut für experimentelle Medizin, Abteilung Immunchemie, Göttingen.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
IGG1-LAMBDA KOL FAB (LIGHT CHAIN)L216Homo sapiensMutation(s): 0 
Gene Names: IGLC1
Find proteins for P0CG04 (Homo sapiens)
Explore P0CG04 
Go to UniProtKB:  P0CG04
NIH Common Fund Data Resources
PHAROS  P0CG04
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
IGG1-LAMBDA KOL FAB (HEAVY CHAIN)H455Homo sapiensMutation(s): 0 
Gene Names: IGHV3-33
Find proteins for P01772 (Homo sapiens)
Explore P01772 
Go to UniProtKB:  P01772
NIH Common Fund Data Resources
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Work: 0.207 
  • Space Group: P 32 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 135.6α = 90
b = 135.6β = 90
c = 82.1γ = 120
Software Package:
Software NamePurpose
EREFrefinement

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 1989-04-18 
  • Released Date: 1989-07-12 
  • Deposition Author(s): Marquart, M., Huber, R.
  • This entry supersedes: 1IG2

Revision History 

  • Version 1.0: 1989-07-12
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2019-10-23
    Changes: Advisory, Data collection, Database references, Other