2IG2

DIR PRIMAERSTRUKTUR DES KRISTALLISIERBAREN MONOKLONALEN IMMUNOGLOBULINS IGG1 KOL. II. AMINOSAEURESEQUENZ DER L-KETTE, LAMBDA-TYP, SUBGRUPPE I (GERMAN)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • R-Value Work: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The primary structure of crystallizable monoclonal immunoglobulin IgG1 Kol. II. Amino acid sequence of the L-chain, gamma-type, subgroup I

Kratzin, H.D.Palm, W.Stangel, M.Schmidt, W.E.Friedrich, J.Hilschmann, N.

(1989) Biol.Chem.Hoppe-Seyler 370: 263-272

  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • The immunoglobulin Kol was the first intact antibody molecule which was characterized by high-resolution X-ray crystallography. Furthermore the complete amino-acid sequence of the heavy (H)-chain is known. Here we report the complete amino-acid seque ...

    The immunoglobulin Kol was the first intact antibody molecule which was characterized by high-resolution X-ray crystallography. Furthermore the complete amino-acid sequence of the heavy (H)-chain is known. Here we report the complete amino-acid sequence of the light (L)-chain of the monoclonal immunoglobulin Kol (IgG1). The polypeptide has an Mr of 22,781, consists of 216 amino acids and due to its structure is of the lambda-type. With the characteristic amino acids threonine, asparagine, threonine, glycine and lysine in positions 101, 114, 116, 154, and 165, respectively the Kol L-chain is of the Mcg isotype. With the proteins Mcg, Mot, Bur, Loc and Mem six myeloma-derived amino-acid sequences of the same isotype are known. The amino-acid sequence of the N-terminal variable part is characteristic of subgroup 1. This contribution completes the primary structure of IgG1 Kol.


    Related Citations: 
    • Structure of the Human Antibody Molecule Kol (Immunoglobulin G1). An Electron Density Map at 5 Angstroms Resolution
      Colman, P.M.,Deisenhofer, J.,Huber, R.,Palm, W.
      (1976) J.Mol.Biol. 100: 257
    • Crystallographic Structure Studies of an Igg Molecule and an Fc Fragment
      Huber, R.,Deisenhofer, J.,Colman, P.M.,Matsushima, M.,Palm, W.
      (1976) Nature 264: 415
    • Crystal Structure of the Human Fab Fragment Kol and its Comparison with the Intact Kol Molecule
      Matsushima, M.,Marquart, M.,Jones, T.A.,Colman, P.M.,Bartels, K.,Huber, R.
      (1978) J.Mol.Biol. 121: 441
    • Crystallographic Refinement and Atomic Models of the Intact Immunoglobulin Molecule Kol and its Antigen-Binding Fragment at 3.0 Angstroms and 1.9 Angstroms Resolution
      Marquart, M.,Deisenhofer, J.,Huber, R.,Palm, W.
      (1980) J.Mol.Biol. 141: 369
    • The Three-Dimensional Structure of Antibodies
      Marquart, M.,Deisenhofer, J.
      (1982) Immunol.Today 3: 160


    Organizational Affiliation

    max-Planck-Institut für experimentelle Medizin, Abteilung Immunchemie, Göttingen.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
IGG1-LAMBDA KOL FAB (LIGHT CHAIN)
L
216Homo sapiensMutation(s): 0 
Gene Names: IGLC1
Find proteins for P0CG04 (Homo sapiens)
Go to UniProtKB:  P0CG04
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
IGG1-LAMBDA KOL FAB (HEAVY CHAIN)
H
455Homo sapiensMutation(s): 0 
Gene Names: IGHV3-33
Find proteins for P01772 (Homo sapiens)
Go to UniProtKB:  P01772
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3 Å
  • R-Value Work: 0.207 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 135.600α = 90.00
b = 135.600β = 90.00
c = 82.100γ = 120.00
Software Package:
Software NamePurpose
EREFrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 1989-04-18 
  • Released Date: 1989-07-12 
  • Deposition Author(s): Marquart, M., Huber, R.
  • This entry supersedes: 1IG2

Revision History 

  • Version 1.0: 1989-07-12
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance