2W2K

Crystal structure of the apo forms of Rhodotorula graminis D- mandelate dehydrogenase at 1.8A.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.199 
  • R-Value Work: 0.154 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal Structure of the Apo and Holo Forms of Rhodotorula Graminis D(-)-Mandelate Dehydrogenase

Vachieri, S.G.Cole, A.R.Bagneris, C.Baker, D.P.Fewson, C.A.Basak, A.K.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
D-MANDELATE DEHYDROGENASE
A
348Rhodotorula graminisMutation(s): 0 
Gene Names: dmdh
Find proteins for Q7LLW9 (Rhodotorula graminis)
Go to UniProtKB:  Q7LLW9
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
D-MANDELATE DEHYDROGENASE
B
348Rhodotorula graminisMutation(s): 0 
Gene Names: dmdh
Find proteins for Q7LLW9 (Rhodotorula graminis)
Go to UniProtKB:  Q7LLW9
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.199 
  • R-Value Work: 0.154 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 50.030α = 90.00
b = 81.071β = 96.27
c = 93.955γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
DENZOdata reduction
PHASERphasing
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-11-17
    Type: Initial release
  • Version 1.1: 2011-05-08
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance