2V0Z

Crystal Structure of Renin with Inhibitor 10 (Aliskiren)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.205 

wwPDB Validation   3D Report Full Report


This is version 2.2 of the entry. See complete history


Literature

Structure-Based Drug Design: The Discovery of Novel Nonpeptide Orally Active Inhibitors of Human Renin

Rahuel, J.Rasetti, V.Maibaum, J.Rueger, H.Goschke, R.Cohen, N.C.Stutz, S.Cumin, F.Fuhrer, W.Wood, J.M.Grutter, M.G.

(2000) Chem Biol 7: 493-504

  • DOI: 10.1016/s1074-5521(00)00134-4
  • Primary Citation of Related Structures:  
    2V16, 2V0Z, 2V10, 2V11, 2V12, 2V13

  • PubMed Abstract: 
  • The aspartic proteinase renin plays an important physiological role in the regulation of blood pressure. It catalyses the first step in the conversion of angiotensinogen to the hormone angiotensin II. In the past, potent peptide inhibitors of renin h ...

    The aspartic proteinase renin plays an important physiological role in the regulation of blood pressure. It catalyses the first step in the conversion of angiotensinogen to the hormone angiotensin II. In the past, potent peptide inhibitors of renin have been developed, but none of these compounds has made it to the end of clinical trials. Our primary aim was to develop novel nonpeptide inhibitors. Based on the available structural information concerning renin-substrate interactions, we synthesized inhibitors in which the peptide portion was replaced by lipophilic moieties that interact with the large hydrophobic S1/S3-binding pocket in renin.


    Related Citations: 
    • The Crystal Structures of Recombinant Glycosylated Human Renin Alone and in Complex with a Transition State Analog Inhibitor.
      Rahuel, J., Priestle, J.P., Grutter, M.G.
      (1991) J Struct Biol 107: 227

    Organizational Affiliation

    Core Technology Area, Novartis Pharma AG, Metabolic and Cardiovascular Diseases, Basle, Switzerland.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
RENINCO340Homo sapiensMutation(s): 0 
Gene Names: REN
EC: 3.4.23.15
Find proteins for P00797 (Homo sapiens)
Explore P00797 
Go to UniProtKB:  P00797
NIH Common Fund Data Resources
PHAROS  P00797
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
C41
Query on C41

Download CCD File 
C, O
ALISKIREN
C30 H53 N3 O6
UXOWGYHJODZGMF-QORCZRPOSA-N
 Ligand Interaction
NAG
Query on NAG

Download CCD File 
C, O
2-acetamido-2-deoxy-beta-D-glucopyranose
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
C41IC50:  0.6000000238418579   nM  Binding MOAD
C41IC50 :  0.6000000238418579   nM  PDBBind
C41IC50:  1.2000000476837158   nM  BindingDB
C41IC50:  3   nM  BindingDB
C41IC50:  2.299999952316284   nM  BindingDB
C41IC50:  2.2100000381469727   nM  BindingDB
C41IC50:  0.4000000059604645   nM  BindingDB
C41IC50:  0.6499999761581421   nM  BindingDB
C41IC50:  0.8399999737739563   nM  BindingDB
C41IC50:  8   nM  BindingDB
C41IC50:  0.6000000238418579   nM  BindingDB
C41IC50:  1.5   nM  BindingDB
C41IC50:  2.9000000953674316   nM  BindingDB
C41IC50:  0.5299999713897705   nM  BindingDB
C41IC50:  0.5   nM  BindingDB
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.266 
  • R-Value Work: 0.205 
  • R-Value Observed: 0.205 
  • Space Group: P 21 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 141.6α = 90
b = 141.6β = 90
c = 141.6γ = 90
Software Package:
Software NamePurpose
X-PLORrefinement
MARXDSdata reduction
MARSCALEdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-07-03
    Type: Initial release
  • Version 1.1: 2011-05-08
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-06-28
    Changes: Data collection
  • Version 2.0: 2018-07-25
    Changes: Advisory, Atomic model, Data collection, Database references, Derived calculations, Non-polymer description, Structure summary
  • Version 2.1: 2019-04-03
    Changes: Data collection, Derived calculations, Source and taxonomy
  • Version 2.2: 2020-07-29
    Type: Remediation
    Reason: Carbohydrate remediation
    Changes: Data collection, Derived calculations, Structure summary