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Download EndnoteCrystal structure of hypothetical protein (NP_242193.1) from Bacillus halodurans at 1.90 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
2O08
CRYSTAL STRUCTURE OF A PUTATIVE HD SUPERFAMILY HYDROLASE (BH1327) FROM BACILLUS HALODURANS AT 1.90 A RESOLUTION
- DOI: 10.2210/pdb2O08/pdb
- Classification: HYDROLASE
- Organism(s): Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
- Expression System: Escherichia coli
- Deposited: 2006-11-27 Released: 2006-12-19
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.9 Å
- R-Value Free: 0.223
- R-Value Work: 0.174
wwPDB Validation 3D Report Full Report
This is version 1.4 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| BH1327 protein | A, B | 188 | Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) | Mutation(s): 0 |
Find proteins for Q9KD90 (Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)) Go to UniProtKB: Q9KD90 | ||||
Small Molecules
| Ligands 5 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | A | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| PG4 Query on PG4 | A, B | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N |  | Ligand Interaction | |
| FE Query on FE | A, B | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |  | Ligand Interaction | |
| NO3 Query on NO3 | B | NITRATE ION N O3 NHNBFGGVMKEFGY-UHFFFAOYSA-N |  | Ligand Interaction | |
| DGI Query on DGI | B | 2'-DEOXYGUANOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 CIKGWCTVFSRMJU-KVQBGUIXSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.9 Å
- R-Value Free: 0.223
- R-Value Work: 0.174
- Space Group: C 2 2 21
- Diffraction Data DOI:
10.18430/M32O08 Protein Diffraction
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 86.830 | α = 90.00 |
| b = 166.510 | β = 90.00 |
| c = 73.410 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| MolProbity | model building |
| SHELX | phasing |
| PDB_EXTRACT | data extraction |
| SHARP | phasing |
| REFMAC | refinement |
| XSCALE | data scaling |
| XDS | data reduction |
Entry History
Deposition Data
- Deposited Date: 2006-11-27
- Released Date: 2006-12-19
- Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History
- Version 1.0: 2006-12-19
Type: Initial release - Version 1.1: 2008-05-01
Type: Version format compliance - Version 1.2: 2011-07-13
Type: Advisory, Version format compliance - Version 1.3: 2017-10-18
Type: Refinement description - Version 1.4: 2017-10-25
Type: Author supporting evidence
