2L43 | pdb_00002l43

Structural basis for histone code recognition by BRPF2-PHD1 finger

• PDB DOI: https://doi.org/10.2210/pdb2L43/pdb
• BMRB: 17244

• Classification: TRANSCRIPTION
• Organism(s): Homo sapiens, synthetic construct
• Expression System: Escherichia coli
• Mutation(s): Yes 


• Deposited: 2010-10-01 Released: 2011-08-31 
• Deposition Author(s): Qin, S., Zhang, J., Wu, J., Shi, Y.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Recognition of unmodified histone H3 by the first PHD finger of Bromodomain-PHD finger protein 2 provides insights into the regulation of histone acetyltransferases MOZ and MORF

Qin, S., Zhang, J., Wu, J., Shi, Y.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 9.92 kDa 
• Atom Count: 604 
• Modelled Residue Count: 80 
• Deposited Residue Count: 88 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Histone H3.3,LINKER,Bromodomain-containing protein 1	A	88	Homo sapiens, synthetic construct	Mutation(s): 2  Gene Names:  H3-3A, H3.3A, H3F3, H3F3A, PP781, H3-3B, H3.3B, H3F3B, BRD1, BRL, BRPF2
UniProt & NIH Common Fund Data Resources
Find proteins for O95696 (Homo sapiens) Explore O95696  Go to UniProtKB:  O95696
PHAROS:  O95696 GTEx:  ENSG00000100425
Find proteins for P84243 (Homo sapiens) Explore P84243  Go to UniProtKB:  P84243
PHAROS:  P84243 GTEx:  ENSG00000132475 ENSG00000163041
UniProt Groups	O95696P84243

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A], C [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2011-08-31 
Deposition Author(s): Qin, S., Zhang, J., Wu, J., Shi, Y.

Revision History  

• Version 1.0: 2011-08-31
  Type: Initial release
  
• Version 1.1: 2020-01-15
  Changes: Data collection, Database references, Source and taxonomy, Structure summary
• Version 1.2: 2024-05-01
  Changes: Data collection, Database references, Derived calculations