2L43

Structural basis for histone code recognition by BRPF2-PHD1 finger


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-15N HSQC0.8mM [U-100% 13C; U-100% 15N] protein-1, 1.6mM ZINC ION-2, 20mM Bis-Tris-3, 150mM sodium chloride-490% H2O/10% D2O0.156.7ambient293
23D CBCA(CO)NH0.8mM [U-100% 13C; U-100% 15N] protein-1, 1.6mM ZINC ION-2, 20mM Bis-Tris-3, 150mM sodium chloride-490% H2O/10% D2O0.156.7ambient293
33D HNCACB0.8mM [U-100% 13C; U-100% 15N] protein-1, 1.6mM ZINC ION-2, 20mM Bis-Tris-3, 150mM sodium chloride-490% H2O/10% D2O0.156.7ambient293
43D C(CO)NH0.8mM [U-100% 13C; U-100% 15N] protein-1, 1.6mM ZINC ION-2, 20mM Bis-Tris-3, 150mM sodium chloride-490% H2O/10% D2O0.156.7ambient293
53D HBHA(CO)NH0.8mM [U-100% 13C; U-100% 15N] protein-1, 1.6mM ZINC ION-2, 20mM Bis-Tris-3, 150mM sodium chloride-490% H2O/10% D2O0.156.7ambient293
63D H(CCO)NH0.8mM [U-100% 13C; U-100% 15N] protein-1, 1.6mM ZINC ION-2, 20mM Bis-Tris-3, 150mM sodium chloride-490% H2O/10% D2O0.156.7ambient293
73D 1H-15N NOESY0.8mM [U-100% 13C; U-100% 15N] protein-1, 1.6mM ZINC ION-2, 20mM Bis-Tris-3, 150mM sodium chloride-490% H2O/10% D2O0.156.7ambient293
83D 1H-13C NOESY0.8mM [U-100% 13C; U-100% 15N] protein-5, 1.6mM ZINC ION-6, 20mM Bis-Tris-7, 150mM sodium chloride-8100% D2O0.156.7ambient293
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX500
NMR Refinement
MethodDetailsSoftware
simulated annealing, torsion angle dynamicsNMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
2data analysisSparky3Goddard
3chemical shift assignmentSparky3Goddard
4peak pickingSparky3Goddard
5data analysisTALOSCornilescu, Delaglio and Bax
6chemical shift calculationTALOSCornilescu, Delaglio and Bax
7data analysisProcheckNMRLaskowski and MacArthur
8structure solutionCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
9refinementCNS1.2Brunger, Adams, Clore, Gros, Nilges and Read
10data analysisMOLMOLKoradi, Billeter and Wuthrich