2IGY

Achiral, Cheap and Potent Inhibitors of Plasmepsins II


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.264 
  • R-Value Work: 0.211 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Achiral, Cheap, and Potent Inhibitors of Plasmepsins I, II, and IV.

Boss, C.Corminboeuf, O.Grisostomi, C.Meyer, S.Jones, A.F.Prade, L.Binkert, C.Fischli, W.Weller, T.Bur, D.

(2006) Chemmedchem 1: 1341-1345


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Plasmepsin-2
A, B
329Plasmodium falciparumMutation(s): 0 
Find proteins for Q17SC2 (Plasmodium falciparum)
Go to UniProtKB:  Q17SC2
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
A2T
Query on A2T

Download SDF File 
Download CCD File 
A, B
N-[1-(3-METHYLBUTYL)PIPERIDIN-4-YL]-N-{4-[METHYL(PYRIDIN-4-YL)AMINO]BENZYL}-4-PENTYLBENZAMIDE
C35 H48 N4 O
WRFRQUOWNCJODU-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
A2TIC50: 113 nM PDBBIND
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.264 
  • R-Value Work: 0.211 
  • Space Group: P 32 1 2
Unit Cell:
Length (Å)Angle (°)
a = 161.099α = 90.00
b = 161.099β = 90.00
c = 73.932γ = 120.00
Software Package:
Software NamePurpose
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2006-09-25 
  • Released Date: 2006-11-28 
  • Deposition Author(s): Prade, L.

Revision History 

  • Version 1.0: 2006-11-28
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance