2EXG

Making Protein-Protein Interactions Drugable: Discovery of Low-Molecular-Weight Ligands for the AF6 PDZ Domain


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Discovery of low-molecular-weight ligands for the AF6 PDZ domain.

Joshi, M.Vargas, C.Boisguerin, P.Diehl, A.Krause, G.Schmieder, P.Moelling, K.Hagen, V.Schade, M.Oschkinat, H.

(2006) Angew.Chem.Int.Ed.Engl. 45: 3790-3795


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Afadin
A
101Homo sapiensMutation(s): 0 
Gene Names: AFDN (AF6, MLLT4)
Find proteins for P55196 (Homo sapiens)
Go to Gene View: AFDN
Go to UniProtKB:  P55196
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
STF
Query on STF

Download SDF File 
Download CCD File 
A
(5R)-2-SULFANYL-5-[4-(TRIFLUOROMETHYL)BENZYL]-1,3-THIAZOL-4-ONE
C11 H8 F3 N O S2
HBYVUUWMCCSRBI-MRVPVSSYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
STFKd: ~50000 nM PDBBIND
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2006-10-17
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance