2CLP

Crystal structure of human aflatoxin B1 aldehyde reductase member 3


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.239 
  • R-Value Observed: 0.240 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.4 of the entry. See complete history


Literature

Crystal Structure of Human Aflatoxin B1 Aldehyde Reductase Member 3

Debreczeni, J.E.Johansson, C.Kavanagh, K.Turnbull, A.Papagrigoriou, E.von Delft, F.Edwards, A.Arrowsmith, C.Weigelt, J.Sundstrom, M.Oppermann, U.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
AFLATOXIN B1 ALDEHYDE REDUCTASE MEMBER 3
A, B, C, D, E, F, G, H
A, B, C, D, E, F, G, H, I, J, K
347Homo sapiensMutation(s): 1 
Gene Names: AKR7A3AFAR2
EC: 1
UniProt & NIH Common Fund Data Resources
Find proteins for O95154 (Homo sapiens)
Explore O95154 
Go to UniProtKB:  O95154
PHAROS:  O95154
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NDP (Subject of Investigation/LOI)
Query on NDP

Download Ideal Coordinates CCD File 
L [auth A] , N [auth B] , O [auth C] , Q [auth D] , R [auth E] , T [auth F] , U [auth G] , W [auth H] , 
L [auth A],  N [auth B],  O [auth C],  Q [auth D],  R [auth E],  T [auth F],  U [auth G],  W [auth H],  X [auth I],  Y [auth J],  Z [auth K]
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H30 N7 O17 P3
ACFIXJIJDZMPPO-NNYOXOHSSA-N
 Ligand Interaction
CA
Query on CA

Download Ideal Coordinates CCD File 
M [auth A], P [auth C], S [auth E], V [auth G]CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.00 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.239 
  • R-Value Observed: 0.240 
  • Space Group: P 32 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 126.963α = 90
b = 126.963β = 90
c = 490.497γ = 120
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
XSCALEdata scaling
PHASERphasing

Structure Validation

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Ligand Structure Quality Assessment  



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2006-05-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Version format compliance
  • Version 1.2: 2013-12-04
    Changes: Database references, Derived calculations, Other, Source and taxonomy
  • Version 1.3: 2018-01-24
    Changes: Database references
  • Version 1.4: 2019-05-08
    Changes: Data collection, Experimental preparation