2BHE

HUMAN CYCLIN DEPENDENT PROTEIN KINASE 2 IN COMPLEX WITH THE INHIBITOR 5-BROMO-INDIRUBINE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.322 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

From the Insoluble Dye Indirubin Towards Highly Active, Soluble Cdk2-Inhibitors

Schaefer, M.Jautelat, R.Brumby, T.Briem, H.Eisenbrand, G.Schwahn, S.Krueger, M.Luecking, U.Prien, O.Siemeister, G.

(2005) Chembiochem 6: 531


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
CELL DIVISION PROTEIN KINASE 2
A
298Homo sapiensMutation(s): 0 
Gene Names: CDK2 (CDKN2)
EC: 2.7.11.22
Find proteins for P24941 (Homo sapiens)
Go to Gene View: CDK2
Go to UniProtKB:  P24941
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
BRY
Query on BRY

Download SDF File 
Download CCD File 
A
(2Z)-5'-BROMO-2,3'-BIINDOLE-2',3(1H,1'H)-DIONE AMMONIATE
C16 H9 Br N2 O2
IEQQJQHHJMQETK-YPKPFQOOSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
BRYIC50: 80 - 1000 nM (100) BINDINGDB
BRYIC50: 1000 nM BINDINGMOAD
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.322 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 53.685α = 90.00
b = 71.918β = 90.00
c = 71.922γ = 90.00
Software Package:
Software NamePurpose
SHELXL-97refinement
AMoREphasing
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-03-09
    Type: Initial release
  • Version 1.1: 2011-05-08
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance