1BMF

BOVINE MITOCHONDRIAL F1-ATPASE

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history. 


Literature

Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria.

Abrahams, J.P., Leslie, A.G., Lutter, R., Walker, J.E.

(1994) Nature 370: 621-628

  • DOI: 10.1038/370621a0
  • Primary Citation of Related Structures:  
    1BMF

  • PubMed Abstract: 

    • In the crystal structure of bovine mitochondrial F1-ATPase determined at 2.8 A resolution, the three catalytic beta-subunits differ in conformation and in the bound nucleotide. The structure supports a catalytic mechanism in intact ATP synthase in wh ...

    In the crystal structure of bovine mitochondrial F1-ATPase determined at 2.8 A resolution, the three catalytic beta-subunits differ in conformation and in the bound nucleotide. The structure supports a catalytic mechanism in intact ATP synthase in which the three catalytic subunits are in different states of the catalytic cycle at any instant. Interconversion of the states may be achieved by rotation of the alpha 3 beta 3 subassembly relative to an alpha-helical domain of the gamma-subunit.

    Related Citations: 
    • Crystallization of F1-ATPase from Bovine Heart Mitochondria
      Lutter, R., Abrahams, J.P., Van Raaij, M.J., Todd, R.J., Lundqvist, T., Buchanan, S.K., Leslie, A.G., Walker, J.E.
      (1993) J Mol Biol 229: 787
    • Inherent Asymmetry of the Structure of F1-ATPase from Bovine Heart Mitochondria at 6.5 A Resolution
      Abrahams, J.P., Lutter, R., Todd, R.J., Van Raaij, M.J., Leslie, A.G., Walker, J.E.
      (1993) EMBO J 12: 1775
    Organizational Affiliation: 

    Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.



Macromolecules
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(by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
BOVINE MITOCHONDRIAL F1-ATPASEA, B, C510Bos taurusMutation(s): 1 
Gene Names: ATP5F1A, ATP5A1, ATP5A2
Membrane protein
Mpstruc		Group: 
TRANSMEMBRANE PROTEINS: ALPHA-HELICAL		Sub Group: 
F-type ATPase		Protein: 
ATP synthase (F1c10)
Find proteins for P19483 (Bos taurus)
Explore P19483 
Go to UniProtKB:  P19483
Protein Feature View
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  • Reference Sequence
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(by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
BOVINE MITOCHONDRIAL F1-ATPASED, E, F482Bos taurusMutation(s): 0 
Gene Names: ATP5F1B, ATP5B
EC: 7.1.2.2
Membrane protein
Mpstruc		Group: 
TRANSMEMBRANE PROTEINS: ALPHA-HELICAL		Sub Group: 
F-type ATPase		Protein: 
ATP synthase (F1c10)
Find proteins for P00829 (Bos taurus)
Explore P00829 
Go to UniProtKB:  P00829
Protein Feature View
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  • Reference Sequence
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(by identity cutoff)  |  Structure
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
BOVINE MITOCHONDRIAL F1-ATPASEG272Bos taurusMutation(s): 0 
Gene Names: ATP5F1C, ATP5C, ATP5C1
Membrane protein
Mpstruc		Group: 
TRANSMEMBRANE PROTEINS: ALPHA-HELICAL		Sub Group: 
F-type ATPase		Protein: 
ATP synthase (F1c10)
Find proteins for P05631 (Bos taurus)
Explore P05631 
Go to UniProtKB:  P05631
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ANP
Query on ANP
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A, B, C, F
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N		 Ligand Interaction
ADP
Query on ADP
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D
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N		 Ligand Interaction
MG
Query on MG
Download CCD File 
A, B, C, D, F
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N		 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 284.22α = 90
b = 107.76β = 90
c = 139.68γ = 90
Software Package:
Software NamePurpose
MULTIPLEmodel building
PROLSQrefinement
MOSFLMdata reduction
CCP4data scaling
MULTIPLEphasing

Structure Validation

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View more in-depth experimental data

Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1996-12-07
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance