1BMF

BOVINE MITOCHONDRIAL F1-ATPASE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria.

Abrahams, J.P.Leslie, A.G.Lutter, R.Walker, J.E.

(1994) Nature 370: 621-628

  • DOI: 10.1038/370621a0
  • Also Cited By: 1E1Q, 1E1R, 1E79, 1EFR, 1H8E, 1H8H, 1OHH, 1QO1, 1W0J, 1W0K, 2CK3

  • PubMed Abstract: 
  • In the crystal structure of bovine mitochondrial F1-ATPase determined at 2.8 A resolution, the three catalytic beta-subunits differ in conformation and in the bound nucleotide. The structure supports a catalytic mechanism in intact ATP synthase in wh ...

    In the crystal structure of bovine mitochondrial F1-ATPase determined at 2.8 A resolution, the three catalytic beta-subunits differ in conformation and in the bound nucleotide. The structure supports a catalytic mechanism in intact ATP synthase in which the three catalytic subunits are in different states of the catalytic cycle at any instant. Interconversion of the states may be achieved by rotation of the alpha 3 beta 3 subassembly relative to an alpha-helical domain of the gamma-subunit.


    Related Citations: 
    • Inherent Asymmetry of the Structure of F1-ATPase from Bovine Heart Mitochondria at 6.5 A Resolution
      Abrahams, J.P.,Lutter, R.,Todd, R.J.,Van Raaij, M.J.,Leslie, A.G.,Walker, J.E.
      (1993) Embo J. 12: 1775
    • Crystallization of F1-ATPase from Bovine Heart Mitochondria
      Lutter, R.,Abrahams, J.P.,Van Raaij, M.J.,Todd, R.J.,Lundqvist, T.,Buchanan, S.K.,Leslie, A.G.,Walker, J.E.
      (1993) J.Mol.Biol. 229: 787


    Organizational Affiliation

    Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
BOVINE MITOCHONDRIAL F1-ATPASE
A, B, C
510Bos taurusGene Names: ATP5A1 (ATP5A2)
Membrane protein
mpstruct
Group: 
TRANSMEMBRANE PROTEINS: ALPHA-HELICAL
Sub Group: 
F-type ATPase
Protein: 
F1-ATPase from bovine heart mitochondria
Find proteins for P19483 (Bos taurus)
Go to Gene View: ATP5A1
Go to UniProtKB:  P19483
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
BOVINE MITOCHONDRIAL F1-ATPASE
D, E, F
482Bos taurusGene Names: ATP5B
EC: 3.6.3.14
Membrane protein
mpstruct
Group: 
TRANSMEMBRANE PROTEINS: ALPHA-HELICAL
Sub Group: 
F-type ATPase
Protein: 
F1-ATPase from bovine heart mitochondria
Find proteins for P00829 (Bos taurus)
Go to Gene View: ATP5B
Go to UniProtKB:  P00829
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
BOVINE MITOCHONDRIAL F1-ATPASE
G
272Bos taurusGene Names: ATP5C1 (ATP5C)
Membrane protein
mpstruct
Group: 
TRANSMEMBRANE PROTEINS: ALPHA-HELICAL
Sub Group: 
F-type ATPase
Protein: 
F1-ATPase from bovine heart mitochondria
Find proteins for P05631 (Bos taurus)
Go to Gene View: ATP5C1
Go to UniProtKB:  P05631
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ADP
Query on ADP

Download SDF File 
Download CCD File 
D
ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
 Ligand Interaction
ANP
Query on ANP

Download SDF File 
Download CCD File 
A, B, C, F
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A, B, C, D, F
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 284.220α = 90.00
b = 107.760β = 90.00
c = 139.680γ = 90.00
Software Package:
Software NamePurpose
CCP4data scaling
MULTIPLEphasing
MULTIPLEmodel building
PROLSQrefinement
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1996-12-07
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance