1YQC

Crystal Structure of Ureidoglycolate Hydrolase (AllA) from Escherichia coli O157:H7


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.709 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.226 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of ureidoglycolate hydrolase (AllA) from Escherichia coli O157:H7

Raymond, S.Tocilj, A.Ajamian, E.Li, Y.Hung, M.-N.Matte, A.Cygler, M.

(2005) Proteins 61: 454-459


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ureidoglycolate hydrolase
A, B
170Escherichia coli O157:H7Mutation(s): 0 
Gene Names: allA
EC: 4.3.2.3
Find proteins for P63486 (Escherichia coli O157:H7)
Go to UniProtKB:  P63486
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GLV
Query on GLV

Download SDF File 
Download CCD File 
A
GLYOXYLIC ACID
GLYOXALATE, GLYOXYLATE
C2 H2 O3
HHLFWLYXYJOTON-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.709 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.226 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 43.047α = 90.00
b = 74.466β = 103.89
c = 56.364γ = 90.00
Software Package:
Software NamePurpose
SOLVEphasing
HKL-2000data reduction
RESOLVEphasing
SCALEPACKdata scaling
DENZOdata reduction
REFMACrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2005-10-18
    Type: Initial release
  • Version 1.1: 2008-04-30
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance
  • Version 1.3: 2017-10-11
    Type: Refinement description