1UZV
High affinity fucose binding of Pseudomonas aeruginosa lectin II: 1.0 A crystal structure of the complex
- PDB DOI: https://doi.org/10.2210/pdb1UZV/pdb
- Classification: LECTIN
- Organism(s): Pseudomonas aeruginosa
- Mutation(s): No 
- Deposited: 2004-03-17 Released: 2004-12-08 
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.00 Å
- R-Value Free: 0.135 
- R-Value Observed: 0.115 
This is version 1.3 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
PSEUDOMONAS AERUGINOSA LECTIN II | 114 | Pseudomonas aeruginosa | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for Q9HYN5 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HYN5  Go to UniProtKB:  Q9HYN5 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9HYN5 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FUC Query on FUC | H [auth A], L [auth B], O [auth C], R [auth D] | alpha-L-fucopyranose C6 H12 O5 SHZGCJCMOBCMKK-SXUWKVJYSA-N | |||
SO4 Query on SO4 | E [auth A], I [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
CA Query on CA | F [auth A] G [auth A] J [auth B] K [auth B] M [auth C] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.00 Å
- R-Value Free: 0.135 
- R-Value Observed: 0.115 
- Space Group: P 1 21 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 52.735 | α = 90 |
b = 72.827 | β = 94.21 |
c = 54.747 | γ = 90 |
Software Name | Purpose |
---|---|
SHELXL-97 | refinement |
DENZO | data reduction |
SCALA | data scaling |
AMoRE | phasing |
ACORN | phasing |
SHELX | phasing |
Entry History 
Deposition Data
- Released Date: 2004-12-08  Deposition Author(s): Mitchell, E., Sabin, C.D., Snajdrova, L., Budova, M., Perret, S., Gautier, C., Gilboa-Garber, N., Koca, J., Wimmerova, M., Imberty, A.
Revision History (Full details and data files)
- Version 1.0: 2004-12-08
Type: Initial release - Version 1.1: 2015-04-15
Changes: Data collection, Database references, Derived calculations, Non-polymer description, Other, Version format compliance - Version 1.2: 2019-05-22
Changes: Data collection, Other, Refinement description - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Other, Structure summary