1O1J
Deoxy hemoglobin (A-GLY-C:V1M,L29F,H58Q; B,D:V1M,L106W)
- PDB DOI: 10.2210/pdb1O1J/pdb
- Classification: OXYGEN STORAGE/TRANSPORT
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2002-11-17 Released: 2002-12-18
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.229
- R-Value Observed: 0.159
This is version 1.5 of the entry. See complete history.
Literature
Download MendeleyMacromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemoglobin Alpha chain | A | 283 | Homo sapiens | Mutation(s): 5 Gene Names: HBA1 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P69905 (Homo sapiens) Explore P69905 Go to UniProtKB: P69905 | |||||
PHAROS: P69905 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P69905 | ||||
Protein Feature ViewExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Hemoglobin Beta chain | B, C [auth D] | 146 | Homo sapiens | Mutation(s): 2 Gene Names: HBB |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P68871 (Homo sapiens) Explore P68871 Go to UniProtKB: P68871 | |||||
PHAROS: P68871 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P68871 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| HEM Query on HEM | D [auth A], E [auth A], F [auth B], G [auth D] | PROTOPORPHYRIN IX CONTAINING FE C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.90 Å
- R-Value Free: 0.229
- R-Value Observed: 0.159
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 63.396 | α = 90 |
| b = 83.47 | β = 99.22 |
| c = 53.643 | γ = 90 |
| Software Name | Purpose |
|---|---|
| SHELXL-97 | refinement |
| XSCALE | data scaling |
| CNS | refinement |
| XDS | data scaling |
| XDS | data reduction |
| CNS | phasing |
Entry History
Deposition Data
- Released Date: 2002-12-18 Deposition Author(s): Brucker, E.A.
Revision History (Full details and data files)
- Version 1.0: 2002-12-18
Type: Initial release - Version 1.1: 2008-04-26
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 1.3: 2017-08-23
Changes: Refinement description, Source and taxonomy - Version 1.4: 2019-07-24
Changes: Data collection, Refinement description - Version 1.5: 2021-10-27
Changes: Database references, Derived calculations
