1J8B

Structure of YbaB from Haemophilus influenzae (HI0442), a protein of unknown function


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.180 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal structure of YbaB from Haemophilus influenzae (HI0442), a protein of unknown function coexpressed with the recombinational DNA repair protein RecR

Lim, K.Tempcyzk, A.Parsons, J.F.Bonander, N.Toedt, J.Kelman, Z.Howard, A.Eisenstein, E.Herzberg, O.

(2003) Proteins 50: 375-379


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
YbaB
A
112Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)N/A
Find proteins for P44711 (Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd))
Go to UniProtKB:  P44711
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.263 
  • R-Value Work: 0.180 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 44.390α = 90.00
b = 132.790β = 90.00
c = 36.220γ = 90.00
Software Package:
Software NamePurpose
SHELXmodel building
DMphasing
MLPHAREphasing
DENZOdata reduction
SOLVEphasing
CNSrefinement
SHELXphasing
SCALEPACKdata scaling
DMmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2003-01-14
    Type: Initial release
  • Version 1.1: 2008-04-27
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Source and taxonomy, Version format compliance
  • Version 1.3: 2012-09-26
    Type: Database references