1I35

SOLUTION STRUCTURE OF THE RAS-BINDING DOMAIN OF THE PROTEIN KINASE BYR2 FROM SCHIZOSACCHAROMYCES POMBE


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 10 
  • Selection Criteria: The submitted conformer models are the 10 structures with the lowest total energy 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Solution structure of the Ras binding domain of the protein kinase Byr2 from Schizosaccharomyces pombe.

Gronwald, W.Huber, F.Grunewald, P.Sporner, M.Wohlgemuth, S.Herrmann, C.Kalbitzer, H.R.

(2001) Structure 9: 1029-1041


  • PubMed Abstract: 
  • After activation, small GTPases such as Ras transfer the incoming signal to effectors by specifically interacting with the binding domain of these proteins. Structural details of the binding domain of different effectors determine which pathway is pr ...

    After activation, small GTPases such as Ras transfer the incoming signal to effectors by specifically interacting with the binding domain of these proteins. Structural details of the binding domain of different effectors determine which pathway is predominantly activated. Byr2 from fission yeast is a functional homolog of Raf, which is the direct downstream target of Ras in mammalians that initiates a protein kinase cascade. The amino acid sequence of Byr2's Ras binding domain is only weakly related to that of Raf, and Byr2's three-dimensional structure is unknown.


    Related Citations: 
    • Letter to the Editor: Sequential NMR assignment of the RAS-binding domain of Byr2
      Huber, F.,Gronwald, W.,Wohlgemuth, S.,Herrmann, C.,Geyer, M.,Wittinghofer, A.,Kalbitzer, H.R.
      (2000) J.Biomol.NMR 16: 355
    • Overcoming the Problems Associated with Poor Spectra Quality of the Protein Kinase Byr2 using Residual Dipolar Couplings
      Gronwald, W.,Brunner, E.,Huber, F.,Wenzler, M.,Herrmann, C.,Kalbitzer, H.R.
      (2001) Protein Sci. 10: 1260


    Organizational Affiliation

    Institut für Biophysik und physikalische Biochemie, Universität Regensburg, Postfach, D-93040, Regensburg, Germany.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PROTEIN KINASE BYR2
A
95Schizosaccharomyces pombe (strain 972 / ATCC 24843)Gene Names: byr2 (ste8)
EC: 2.7.11.25
Find proteins for P28829 (Schizosaccharomyces pombe (strain 972 / ATCC 24843))
Go to UniProtKB:  P28829
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 10 
  • Selection Criteria: The submitted conformer models are the 10 structures with the lowest total energy 
  • Olderado: 1I35 Olderado

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2001-12-12
    Type: Initial release
  • Version 1.1: 2008-04-27
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance