1BB5
HUMAN LYSOZYME MUTANT A96L COMPLEXED WITH CHITOTRIOSE
- PDB DOI: 10.2210/pdb1BB5/pdb
- Classification: HYDROLASE
- Organism(s): Homo sapiens
- Expression System: Komagataella pastoris
- Mutation(s): Yes
- Deposited: 1998-04-28 Released: 1998-08-12
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.260
- R-Value Work: 0.200
- R-Value Observed: 0.200
wwPDB Validation 3D Report Full Report
This is version 2.1 of the entry. See complete history.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| LYSOZYME | A, B | 130 | Homo sapiens | Mutation(s): 1 Gene Names: LYZ, LZM EC: 3.2.1.17 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61626 (Homo sapiens) Explore P61626 Go to UniProtKB: P61626 | |||||
PHAROS: P61626 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P61626 | ||||
Protein Feature ViewExpand | |||||
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Oligosaccharides
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Chain Length | 2D Diagram | Glycosylation | 3D Interactions |
| 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | C, D | 3 |  | N/A | Oligosaccharides Interaction |
Glycosylation Resources | |||||
GlyTouCan: G47362BJ GlyCosmos: G47362BJ | |||||
Biologically Interesting Molecules (External Reference) 1 Unique
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
| PRD_900017 Query on PRD_900017 | C, D | triacetyl-beta-chitotriose | Oligosaccharide / Inhibitor |  | Ligand Interaction |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.80 Å
- R-Value Free: 0.260
- R-Value Work: 0.200
- R-Value Observed: 0.200
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 42.94 | α = 90 |
| b = 64.81 | β = 90 |
| c = 109.14 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MOSFLM | data reduction |
| CCP4 | data reduction |
| AMoRE | phasing |
| X-PLOR | refinement |
| CCP4 | data scaling |
Entry History
Deposition Data
- Released Date: 1998-08-12 Deposition Author(s): Headley, A.G., Roe, S.M., Pearl, L.H.
Revision History (Full details and data files)
- Version 1.0: 1998-08-12
Type: Initial release - Version 1.1: 2008-03-24
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance - Version 2.0: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Advisory, Atomic model, Data collection, Derived calculations, Non-polymer description, Structure summary - Version 2.1: 2021-11-03
Changes: Database references, Structure summary
