Biological Assembly 1  

 3D View: Structure | 1D-3D View | Validation Report

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 2-mer - A1B1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 13.77 kDa 
• Atom Count: 972 
• Modelled Residue Count: 117 
• Deposited Residue Count: 117 
• Unique protein chains: 2

1AOU

NMR STRUCTURE OF THE FYN SH2 DOMAIN COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE, 22 STRUCTURES

• PDB DOI: 10.2210/pdb1AOU/pdb

• Classification: COMPLEX (PROTO-ONCOGENE/EARLY PROTEIN)
• Organism(s): Homo sapiens, Mesocricetus auratus polyomavirus 1
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 1997-07-10 Released: 1998-01-14 
• Deposition Author(s): Mulhern, T.D., Shaw, G.L., Morton, C.J., Day, A.J., Campbell, I.D.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 22 
• Selection Criteria: LEAST VIOLATIONS 

Literature

The SH2 domain from the tyrosine kinase Fyn in complex with a phosphotyrosyl peptide reveals insights into domain stability and binding specificity.

Mulhern, T.D., Shaw, G.L., Morton, C.J., Day, A.J., Campbell, I.D.

(1997) Structure 5: 1313-1323

• PubMed: 9351806 
• DOI: 10.1016/s0969-2126(97)00283-9
• Primary Citation of Related Structures:  
  1AOT, 1AOU


• PubMed Abstract: 
  

SH2 domains are found in a variety of signal transduction proteins; they bind phosphotyrosine-containing sequences, allowing them to both recognize target molecules and regulate intramolecular kinase activity. Fyn is a member of the Src family of tyrosine kinases that are involved in signal transduction by association with a number of membrane receptors. The kinase activity of these signalling proteins is modulated by switching the binding mode of their SH2 and SH3 domains from intramolecular to intermolecular. The molecular basis of the signalling roles observed for different Src family members is still not well understood; although structures have been determined for the SH2 domains of other Src family molecules, this is the first structure of the Fyn SH2 domain.

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Related Citations: 

• Solution Studies of the Sh2 Domain from the Fyn Tyrosine Kinase: Secondary Structure, Backbone Dynamics and Protein Association
  Pintar, A., Hensmann, M., Jumel, K., Pitkeathly, M., Harding, S.E., Campbell, I.D.
  (1996) Eur Biophys J 24: 371

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Organizational Affiliation: 

Oxford Centre for Molecular Sciences, UK.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
FYN PROTEIN-TYROSINE KINASE	A [auth F]	106	Homo sapiens	Mutation(s): 3  Gene Names: LYSS, FYN EC: 2.7.1.112 (PDB Primary Data), 2.7.10.2 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for P06241 (Homo sapiens) Explore P06241  Go to UniProtKB:  P06241
PHAROS:  P06241

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
PHOSPHOTYROSYL PEPTIDE	B [auth P]	11	Mesocricetus auratus polyomavirus 1	Mutation(s): 0
UniProt
Find proteins for P03079 (Hamster polyomavirus) Explore P03079  Go to UniProtKB:  P03079

Small Molecules

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
PTR	B [auth P]	L-PEPTIDE LINKING	C9 H12 N O6 P		TYR

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 200 
• Conformers Submitted: 22 
• Selection Criteria: LEAST VIOLATIONS 
• OLDERADO: 1AOU Olderado

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 1997-07-10 
• Released Date: 1998-01-14 
Deposition Author(s): Mulhern, T.D., Shaw, G.L., Morton, C.J., Day, A.J., Campbell, I.D.

Revision History  

• Version 1.0: 1998-01-14
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2021-11-03
  Changes: Database references, Derived calculations, Other