7LH5

Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAs

  • Classification: RIBOSOME
  • Organism(s): Thermus thermophilus HB8, Escherichia coli
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2021-01-21 Released: 2021-06-02 
  • Deposition Author(s): Golkar, T., Berghuis, A.M., Schmeing, T.M.
  • Funding Organization(s): Canadian Institutes of Health Research (CIHR), National Institutes of Health/National Institute on Deafness and Other Communication Disorders (NIH/NIDCD), National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.27 Å
  • R-Value Free: 0.277 
  • R-Value Work: 0.214 
  • R-Value Observed: 0.217 

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This is version 1.2 of the entry. See complete history


Literature

Structural basis for plazomicin antibiotic action and resistance.

Golkar, T.Bassenden, A.V.Maiti, K.Arya, D.P.Schmeing, T.M.Berghuis, A.M.

(2021) Commun Biol 4: 729-729

  • DOI: https://doi.org/10.1038/s42003-021-02261-4
  • Primary Citation of Related Structures:  
    6VOU, 7LH5

  • PubMed Abstract: 

    The approval of plazomicin broadened the clinical library of aminoglycosides available for use against emerging bacterial pathogens. Contrarily to other aminoglycosides, resistance to plazomicin is limited; still, instances of resistance have been reported in clinical settings. Here, we present structural insights into the mechanism of plazomicin action and the mechanisms of clinical resistance. The structural data reveal that plazomicin exclusively binds to the 16S ribosomal A site, where it likely interferes with the fidelity of mRNA translation. The unique extensions to the core aminoglycoside scaffold incorporated into the structure of plazomicin do not interfere with ribosome binding, which is analogously seen in the binding of this antibiotic to the AAC(2')-Ia resistance enzyme. The data provides a structural rationale for resistance conferred by drug acetylation and ribosome methylation, i.e., the two mechanisms of resistance observed clinically. Finally, the crystal structures of plazomicin in complex with both its target and the clinically relevant resistance factor provide a roadmap for next-generation drug development that aims to ameliorate the impact of antibiotic resistance.


  • Organizational Affiliation

    Department of Biochemistry, McGill University, McIntyre Medical Building, Montréal, QC, Canada.


Macromolecules

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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S2B [auth AB],
IB [auth CB]
256Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S3C [auth AC],
JB [auth CC]
239Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S4D [auth AD],
KB [auth CD]
209Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S5E [auth AE],
LB [auth CE]
162Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S6F [auth AF],
MB [auth CF]
101Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S7G [auth AG],
NB [auth CG]
156Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S8H [auth AH],
OB [auth CH]
138Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S9I [auth AI],
PB [auth CI]
128Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S10J [auth AJ],
QB [auth CJ]
105Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S11K [auth AK],
RB [auth CK]
129Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S12L [auth AL],
SB [auth CL]
132Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S13M [auth AM],
TB [auth CM]
126Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S14 type ZN [auth AN],
UB [auth CN]
61Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S15O [auth AO],
VB [auth CO]
89Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S16P [auth AP],
WB [auth CP]
88Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S17Q [auth AQ],
XB [auth CQ]
105Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S18R [auth AR],
YB [auth CR]
88Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S19S [auth AS],
ZB [auth CS]
93Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein S20AC [auth CT],
T [auth AT]
106Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
30S ribosomal protein ThxBC [auth CU],
U [auth AU]
27Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L27GC [auth D0],
Z [auth B0]
85Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L28AA [auth B1],
HC [auth D1]
98Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L29BA [auth B2],
IC [auth D2]
72Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L30CA [auth B3],
JC [auth D3]
60Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L31DA [auth B4],
KC [auth D4]
71Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L32EA [auth B5],
LC [auth D5]
60Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L33FA [auth B6],
MC [auth D6]
54Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L34GA [auth B7],
NC [auth D7]
49Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L35HA [auth B8],
OC [auth D8]
65Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L36IA [auth B9],
PC [auth D9]
37Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L1LA [auth BC],
SC [auth DC]
229Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L2MA [auth BD],
TC [auth DD]
276Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L3NA [auth BE],
UC [auth DE]
206Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L4OA [auth BF],
VC [auth DF]
210Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L5PA [auth BG],
WC [auth DG]
182Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L6QA [auth BH],
XC [auth DH]
180Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L9RA [auth BI],
YC [auth DI]
148Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L10SA [auth BJ],
ZC [auth DJ]
173Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L11AD [auth DK],
TA [auth BK]
147Thermus thermophilus HB8Mutation(s): 0 
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L13BD [auth DN],
UA [auth BN]
140Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L14CD [auth DO],
VA [auth BO]
122Thermus thermophilus HB8Mutation(s): 0 
UniProt
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UniProt GroupQ5SHP8
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L15DD [auth DP],
WA [auth BP]
150Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L16ED [auth DQ],
XA [auth BQ]
141Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L17FD [auth DR],
YA [auth BR]
118Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L18GD [auth DS],
ZA [auth BS]
112Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L19AB [auth BT],
HD [auth DT]
146Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L20BB [auth BU],
ID [auth DU]
118Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L21CB [auth BV],
JD [auth DV]
101Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L22DB [auth BW],
KD [auth DW]
113Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L23EB [auth BX],
LD [auth DX]
96Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L24FB [auth BY],
MD [auth DY]
110Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
50S ribosomal protein L25GB [auth BZ],
ND [auth DZ]
206Thermus thermophilus HB8Mutation(s): 0 
UniProt
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Entity ID: 1
MoleculeChains LengthOrganismImage
16S ribosomal RNAA [auth AA],
HB [auth CA]
1,520Thermus thermophilus HB8
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Entity ID: 22
MoleculeChains LengthOrganismImage
P-site tRNA fMetCC [auth CV],
V [auth AV]
77Escherichia coli
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Entity ID: 23
MoleculeChains LengthOrganismImage
E-Site tRNA Phe and A-site tRNA PheDC [auth CW],
FC [auth CY],
W [auth AW],
Y [auth AY]
76Escherichia coli
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Entity ID: 24
MoleculeChains LengthOrganismImage
mRNAEC [auth CX],
X [auth AX]
24Escherichia coli
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Entity ID: 35
MoleculeChains LengthOrganismImage
23S ribosomal RNAJA [auth BA],
QC [auth DA]
2,839Thermus thermophilus HB8
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Entity ID: 36
MoleculeChains LengthOrganismImage
5S ribosomal RNAKA [auth BB],
RC [auth DB]
122Thermus thermophilus HB8
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Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
EDS
Query on EDS

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KL [auth AA],
LNA [auth CA]
(2S)-4-amino-N-[(1R,2S,3S,4R,5S)-5-amino-4-{[(2S,3R)-3-amino-6-{[(2-hydroxyethyl)amino]methyl}-3,4-dihydro-2H-pyran-2-y l]oxy}-2-{[3-deoxy-4-C-methyl-3-(methylamino)-beta-L-arabinopyranosyl]oxy}-3-hydroxycyclohexyl]-2-hydroxybutanamide
C25 H48 N6 O10
IYDYFVUFSPQPPV-PEXOCOHZSA-N
ZN
Query on ZN

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AOA [auth CN]
JN [auth B9]
SL [auth AD]
VL [auth AN]
VNA [auth CD]
AOA [auth CN],
JN [auth B9],
SL [auth AD],
VL [auth AN],
VNA [auth CD],
YOA [auth D9]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

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AAA [auth BA]
AAB [auth DA]
ABA [auth BA]
ABB [auth DA]
ACA [auth BA]
AAA [auth BA],
AAB [auth DA],
ABA [auth BA],
ABB [auth DA],
ACA [auth BA],
ACB [auth DA],
ADA [auth BA],
ADB [auth DA],
AE [auth AA],
AEA [auth BA],
AEB [auth DA],
AF [auth AA],
AFA [auth BB],
AG [auth AA],
AGA [auth BU],
AH [auth AA],
AHA [auth CA],
AI [auth AA],
AIA [auth CA],
AJ [auth AA],
AJA [auth CA],
AK [auth AA],
AKA [auth CA],
AL [auth AA],
ALA [auth CA],
AM [auth AV],
AMA [auth CA],
AN [auth AX],
ANA [auth CA],
AO [auth BA],
AP [auth BA],
APA [auth DA],
AQ [auth BA],
AQA [auth DA],
AR [auth BA],
ARA [auth DA],
AS [auth BA],
ASA [auth DA],
AT [auth BA],
ATA [auth DA],
AU [auth BA],
AUA [auth DA],
AV [auth BA],
AVA [auth DA],
AW [auth BA],
AWA [auth DA],
AX [auth BA],
AXA [auth DA],
AY [auth BA],
AYA [auth DA],
AZ [auth BA],
AZA [auth DA],
BAA [auth BA],
BAB [auth DA],
BBA [auth BA],
BBB [auth DA],
BCA [auth BA],
BCB [auth DA],
BDA [auth BA],
BDB [auth DA],
BE [auth AA],
BEA [auth BA],
BEB [auth DB],
BF [auth AA],
BFA [auth BB],
BG [auth AA],
BGA [auth BU],
BH [auth AA],
BHA [auth CA],
BI [auth AA],
BIA [auth CA],
BJ [auth AA],
BJA [auth CA],
BK [auth AA],
BKA [auth CA],
BL [auth AA],
BLA [auth CA],
BM [auth AV],
BMA [auth CA],
BN [auth B0],
BNA [auth CA],
BO [auth BA],
BOA [auth CU],
BP [auth BA],
BPA [auth DA],
BQ [auth BA],
BQA [auth DA],
BR [auth BA],
BRA [auth DA],
BS [auth BA],
BSA [auth DA],
BT [auth BA],
BTA [auth DA],
BU [auth BA],
BUA [auth DA],
BV [auth BA],
BVA [auth DA],
BW [auth BA],
BWA [auth DA],
BX [auth BA],
BXA [auth DA],
BY [auth BA],
BYA [auth DA],
BZ [auth BA],
BZA [auth DA],
CAA [auth BA],
CAB [auth DA],
CBA [auth BA],
CBB [auth DA],
CCA [auth BA],
CCB [auth DA],
CDA [auth BA],
CDB [auth DA],
CE [auth AA],
CEA [auth BA],
CEB [auth DB],
CF [auth AA],
CFA [auth BB],
CG [auth AA],
CGA [auth BU],
CH [auth AA],
CHA [auth CA],
CI [auth AA],
CIA [auth CA],
CJ [auth AA],
CJA [auth CA],
CK [auth AA],
CKA [auth CA],
CL [auth AA],
CLA [auth CA],
CM [auth AV],
CMA [auth CA],
CN [auth B1],
CNA [auth CA],
CO [auth BA],
COA [auth CV],
CP [auth BA],
CPA [auth DA],
CQ [auth BA],
CQA [auth DA],
CR [auth BA],
CRA [auth DA],
CS [auth BA],
CSA [auth DA],
CT [auth BA],
CTA [auth DA],
CU [auth BA],
CUA [auth DA],
CV [auth BA],
CVA [auth DA],
CW [auth BA],
CWA [auth DA],
CX [auth BA],
CXA [auth DA],
CY [auth BA],
CYA [auth DA],
CZ [auth BA],
CZA [auth DA],
DAA [auth BA],
DAB [auth DA],
DBA [auth BA],
DBB [auth DA],
DCA [auth BA],
DCB [auth DA],
DDA [auth BA],
DDB [auth DA],
DE [auth AA],
DEA [auth BA],
DEB [auth DB],
DF [auth AA],
DFA [auth BB],
DG [auth AA],
DGA [auth BU],
DH [auth AA],
DHA [auth CA],
DI [auth AA],
DIA [auth CA],
DJ [auth AA],
DJA [auth CA],
DK [auth AA],
DKA [auth CA],
DL [auth AA],
DLA [auth CA],
DM [auth AV],
DMA [auth CA],
DN [auth B1],
DNA [auth CA],
DO [auth BA],
DOA [auth CV],
DP [auth BA],
DPA [auth DA],
DQ [auth BA],
DQA [auth DA],
DR [auth BA],
DRA [auth DA],
DS [auth BA],
DSA [auth DA],
DT [auth BA],
DTA [auth DA],
DU [auth BA],
DUA [auth DA],
DV [auth BA],
DVA [auth DA],
DW [auth BA],
DWA [auth DA],
DX [auth BA],
DXA [auth DA],
DY [auth BA],
DYA [auth DA],
DZ [auth BA],
DZA [auth DA],
EAA [auth BA],
EAB [auth DA],
EBA [auth BA],
EBB [auth DA],
ECA [auth BA],
ECB [auth DA],
EDA [auth BA],
EDB [auth DA],
EE [auth AA],
EEA [auth BA],
EEB [auth DB],
EF [auth AA],
EFA [auth BB],
EG [auth AA],
EGA [auth BV],
EH [auth AA],
EHA [auth CA],
EI [auth AA],
EIA [auth CA],
EJ [auth AA],
EJA [auth CA],
EK [auth AA],
EKA [auth CA],
EL [auth AA],
ELA [auth CA],
EM [auth AW],
EMA [auth CA],
EN [auth B2],
ENA [auth CA],
EO [auth BA],
EOA [auth CV],
EP [auth BA],
EPA [auth DA],
EQ [auth BA],
EQA [auth DA],
ER [auth BA],
ERA [auth DA],
ES [auth BA],
ESA [auth DA],
ET [auth BA],
ETA [auth DA],
EU [auth BA],
EUA [auth DA],
EV [auth BA],
EVA [auth DA],
EW [auth BA],
EWA [auth DA],
EX [auth BA],
EXA [auth DA],
EY [auth BA],
EYA [auth DA],
EZ [auth BA],
EZA [auth DA],
FAA [auth BA],
FAB [auth DA],
FBA [auth BA],
FBB [auth DA],
FCA [auth BA],
FCB [auth DA],
FDA [auth BA],
FDB [auth DA],
FE [auth AA],
FEA [auth BA],
FEB [auth DB],
FF [auth AA],
FFA [auth BB],
FG [auth AA],
FGA [auth BX],
FH [auth AA],
FHA [auth CA],
FI [auth AA],
FIA [auth CA],
FJ [auth AA],
FJA [auth CA],
FK [auth AA],
FKA [auth CA],
FL [auth AA],
FLA [auth CA],
FM [auth AW],
FMA [auth CA],
FN [auth B5],
FNA [auth CA],
FO [auth BA],
FOA [auth CV],
FP [auth BA],
FPA [auth DA],
FQ [auth BA],
FQA [auth DA],
FR [auth BA],
FRA [auth DA],
FS [auth BA],
FSA [auth DA],
FT [auth BA],
FTA [auth DA],
FU [auth BA],
FUA [auth DA],
FV [auth BA],
FVA [auth DA],
FW [auth BA],
FWA [auth DA],
FX [auth BA],
FXA [auth DA],
FY [auth BA],
FYA [auth DA],
FZ [auth BA],
FZA [auth DA],
GAA [auth BA],
GAB [auth DA],
GBA [auth BA],
GBB [auth DA],
GCA [auth BA],
GCB [auth DA],
GDA [auth BA],
GDB [auth DA],
GE [auth AA],
GEA [auth BA],
GEB [auth DB],
GF [auth AA],
GFA [auth BB],
GG [auth AA],
GGA [auth BX],
GH [auth AA],
GHA [auth CA],
GI [auth AA],
GIA [auth CA],
GJ [auth AA],
GJA [auth CA],
GK [auth AA],
GKA [auth CA],
GL [auth AA],
GLA [auth CA],
GM [auth AW],
GMA [auth CA],
GN [auth B7],
GNA [auth CA],
GO [auth BA],
GOA [auth CW],
GP [auth BA],
GPA [auth DA],
GQ [auth BA],
GQA [auth DA],
GR [auth BA],
GRA [auth DA],
GS [auth BA],
GSA [auth DA],
GT [auth BA],
GTA [auth DA],
GU [auth BA],
GUA [auth DA],
GV [auth BA],
GVA [auth DA],
GW [auth BA],
GWA [auth DA],
GX [auth BA],
GXA [auth DA],
GY [auth BA],
GYA [auth DA],
GZ [auth BA],
GZA [auth DA],
HAA [auth BA],
HAB [auth DA],
HBA [auth BA],
HBB [auth DA],
HCA [auth BA],
HCB [auth DA],
HDA [auth BA],
HDB [auth DA],
HE [auth AA],
HEA [auth BA],
HEB [auth DB],
HF [auth AA],
HFA [auth BB],
HG [auth AA],
HGA [auth CA],
HH [auth AA],
HHA [auth CA],
HI [auth AA],
HIA [auth CA],
HJ [auth AA],
HJA [auth CA],
HK [auth AA],
HKA [auth CA],
HL [auth AA],
HLA [auth CA],
HM [auth AW],
HMA [auth CA],
HN [auth B8],
HNA [auth CA],
HO [auth BA],
HOA [auth CW],
HP [auth BA],
HPA [auth DA],
HQ [auth BA],
HQA [auth DA],
HR [auth BA],
HRA [auth DA],
HS [auth BA],
HSA [auth DA],
HT [auth BA],
HTA [auth DA],
HU [auth BA],
HUA [auth DA],
HV [auth BA],
HVA [auth DA],
HW [auth BA],
HWA [auth DA],
HX [auth BA],
HXA [auth DA],
HY [auth BA],
HYA [auth DA],
HZ [auth BA],
HZA [auth DA],
IAA [auth BA],
IAB [auth DA],
IBA [auth BA],
IBB [auth DA],
ICA [auth BA],
ICB [auth DA],
IDA [auth BA],
IDB [auth DA],
IE [auth AA],
IEA [auth BA],
IEB [auth DB],
IF [auth AA],
IFA [auth BB],
IG [auth AA],
IGA [auth CA],
IH [auth AA],
IHA [auth CA],
II [auth AA],
IIA [auth CA],
IJ [auth AA],
IJA [auth CA],
IK [auth AA],
IKA [auth CA],
IL [auth AA],
ILA [auth CA],
IM [auth AW],
IMA [auth CA],
IN [auth B8],
INA [auth CA],
IO [auth BA],
IOA [auth CW],
IP [auth BA],
IPA [auth DA],
IQ [auth BA],
IQA [auth DA],
IR [auth BA],
IRA [auth DA],
IS [auth BA],
ISA [auth DA],
IT [auth BA],
ITA [auth DA],
IU [auth BA],
IUA [auth DA],
IV [auth BA],
IVA [auth DA],
IW [auth BA],
IWA [auth DA],
IX [auth BA],
IXA [auth DA],
IY [auth BA],
IYA [auth DA],
IZ [auth BA],
IZA [auth DA],
JAA [auth BA],
JAB [auth DA],
JBA [auth BA],
JBB [auth DA],
JCA [auth BA],
JCB [auth DA],
JDA [auth BA],
JDB [auth DA],
JE [auth AA],
JEA [auth BA],
JEB [auth DB],
JF [auth AA],
JFA [auth BB],
JG [auth AA],
JGA [auth CA],
JH [auth AA],
JHA [auth CA],
JI [auth AA],
JIA [auth CA],
JJ [auth AA],
JJA [auth CA],
JK [auth AA],
JKA [auth CA],
JL [auth AA],
JLA [auth CA],
JM [auth AW],
JMA [auth CA],
JNA [auth CA],
JO [auth BA],
JOA [auth CW],
JP [auth BA],
JPA [auth DA],
JQ [auth BA],
JQA [auth DA],
JR [auth BA],
JRA [auth DA],
JS [auth BA],
JSA [auth DA],
JT [auth BA],
JTA [auth DA],
JU [auth BA],
JUA [auth DA],
JV [auth BA],
JVA [auth DA],
JW [auth BA],
JWA [auth DA],
JX [auth BA],
JXA [auth DA],
JY [auth BA],
JYA [auth DA],
JZ [auth BA],
JZA [auth DA],
KAA [auth BA],
KAB [auth DA],
KBA [auth BA],
KBB [auth DA],
KCA [auth BA],
KCB [auth DA],
KDA [auth BA],
KDB [auth DA],
KE [auth AA],
KEA [auth BA],
KEB [auth DB],
KF [auth AA],
KFA [auth BB],
KG [auth AA],
KGA [auth CA],
KH [auth AA],
KHA [auth CA],
KI [auth AA],
KIA [auth CA],
KJ [auth AA],
KJA [auth CA],
KK [auth AA],
KKA [auth CA],
KLA [auth CA],
KM [auth AW],
KMA [auth CA],
KN [auth BA],
KNA [auth CA],
KO [auth BA],
KOA [auth CW],
KP [auth BA],
KPA [auth DA],
KQ [auth BA],
KQA [auth DA],
KR [auth BA],
KRA [auth DA],
KS [auth BA],
KSA [auth DA],
KT [auth BA],
KTA [auth DA],
KU [auth BA],
KUA [auth DA],
KV [auth BA],
KVA [auth DA],
KW [auth BA],
KWA [auth DA],
KX [auth BA],
KXA [auth DA],
KY [auth BA],
KYA [auth DA],
KZ [auth BA],
KZA [auth DA],
LAA [auth BA],
LAB [auth DA],
LBA [auth BA],
LBB [auth DA],
LCA [auth BA],
LCB [auth DA],
LDA [auth BA],
LDB [auth DA],
LE [auth AA],
LEA [auth BA],
LEB [auth DB],
LF [auth AA],
LFA [auth BB],
LG [auth AA],
LGA [auth CA],
LH [auth AA],
LHA [auth CA],
LI [auth AA],
LIA [auth CA],
LJ [auth AA],
LJA [auth CA],
LK [auth AA],
LKA [auth CA],
LL [auth AA],
LLA [auth CA],
LM [auth AW],
LMA [auth CA],
LN [auth BA],
LO [auth BA],
LOA [auth CW],
LP [auth BA],
LPA [auth DA],
LQ [auth BA],
LQA [auth DA],
LR [auth BA],
LRA [auth DA],
LS [auth BA],
LSA [auth DA],
LT [auth BA],
LTA [auth DA],
LU [auth BA],
LUA [auth DA],
LV [auth BA],
LVA [auth DA],
LW [auth BA],
LWA [auth DA],
LX [auth BA],
LXA [auth DA],
LY [auth BA],
LYA [auth DA],
LZ [auth BA],
LZA [auth DA],
MAA [auth BA],
MAB [auth DA],
MBA [auth BA],
MBB [auth DA],
MCA [auth BA],
MCB [auth DA],
MDA [auth BA],
MDB [auth DA],
ME [auth AA],
MEA [auth BA],
MEB [auth DB],
MF [auth AA],
MFA [auth BB],
MG [auth AA],
MGA [auth CA],
MH [auth AA],
MHA [auth CA],
MI [auth AA],
MIA [auth CA],
MJ [auth AA],
MJA [auth CA],
MK [auth AA],
MKA [auth CA],
ML [auth AA],
MLA [auth CA],
MM [auth AW],
MMA [auth CA],
MN [auth BA],
MNA [auth CA],
MO [auth BA],
MOA [auth CW],
MP [auth BA],
MPA [auth DA],
MQ [auth BA],
MQA [auth DA],
MR [auth BA],
MRA [auth DA],
MS [auth BA],
MSA [auth DA],
MT [auth BA],
MTA [auth DA],
MU [auth BA],
MUA [auth DA],
MV [auth BA],
MVA [auth DA],
MW [auth BA],
MWA [auth DA],
MX [auth BA],
MXA [auth DA],
MY [auth BA],
MYA [auth DA],
MZ [auth BA],
MZA [auth DA],
NAA [auth BA],
NAB [auth DA],
NBA [auth BA],
NBB [auth DA],
NCA [auth BA],
NCB [auth DA],
NDA [auth BA],
NDB [auth DA],
NE [auth AA],
NEA [auth BA],
NEB [auth DE],
NF [auth AA],
NFA [auth BB],
NG [auth AA],
NGA [auth CA],
NH [auth AA],
NHA [auth CA],
NI [auth AA],
NIA [auth CA],
NJ [auth AA],
NJA [auth CA],
NK [auth AA],
NKA [auth CA],
NL [auth AA],
NLA [auth CA],
NM [auth AW],
NMA [auth CA],
NN [auth BA],
NNA [auth CA],
NO [auth BA],
NOA [auth CW],
NP [auth BA],
NPA [auth DA],
NQ [auth BA],
NQA [auth DA],
NR [auth BA],
NRA [auth DA],
NS [auth BA],
NSA [auth DA],
NT [auth BA],
NTA [auth DA],
NU [auth BA],
NUA [auth DA],
NV [auth BA],
NVA [auth DA],
NW [auth BA],
NWA [auth DA],
NX [auth BA],
NXA [auth DA],
NY [auth BA],
NYA [auth DA],
NZ [auth BA],
NZA [auth DA],
OAA [auth BA],
OAB [auth DA],
OBA [auth BA],
OBB [auth DA],
OCA [auth BA],
OCB [auth DA],
OD [auth AA],
ODA [auth BA],
ODB [auth DA],
OE [auth AA],
OEA [auth BA],
OEB [auth DF],
OF [auth AA],
OFA [auth BB],
OG [auth AA],
OGA [auth CA],
OH [auth AA],
OHA [auth CA],
OI [auth AA],
OIA [auth CA],
OJ [auth AA],
OJA [auth CA],
OK [auth AA],
OKA [auth CA],
OL [auth AA],
OLA [auth CA],
OM [auth AW],
OMA [auth CA],
ON [auth BA],
ONA [auth CA],
OO [auth BA],
OOA [auth CW],
OP [auth BA],
OPA [auth DA],
OQ [auth BA],
OQA [auth DA],
OR [auth BA],
ORA [auth DA],
OS [auth BA],
OSA [auth DA],
OT [auth BA],
OTA [auth DA],
OU [auth BA],
OUA [auth DA],
OV [auth BA],
OVA [auth DA],
OW [auth BA],
OWA [auth DA],
OX [auth BA],
OXA [auth DA],
OY [auth BA],
OYA [auth DA],
OZ [auth BA],
OZA [auth DA],
PAA [auth BA],
PAB [auth DA],
PBA [auth BA],
PBB [auth DA],
PCA [auth BA],
PCB [auth DA],
PD [auth AA],
PDA [auth BA],
PDB [auth DA],
PE [auth AA],
PEA [auth BA],
PEB [auth DF],
PF [auth AA],
PFA [auth BB],
PG [auth AA],
PGA [auth CA],
PH [auth AA],
PHA [auth CA],
PI [auth AA],
PIA [auth CA],
PJ [auth AA],
PJA [auth CA],
PK [auth AA],
PKA [auth CA],
PL [auth AA],
PLA [auth CA],
PM [auth AW],
PMA [auth CA],
PN [auth BA],
PNA [auth CA],
PO [auth BA],
POA [auth CW],
PP [auth BA],
PPA [auth DA],
PQ [auth BA],
PQA [auth DA],
PR [auth BA],
PRA [auth DA],
PS [auth BA],
PSA [auth DA],
PT [auth BA],
PTA [auth DA],
PU [auth BA],
PUA [auth DA],
PV [auth BA],
PVA [auth DA],
PW [auth BA],
PWA [auth DA],
PX [auth BA],
PXA [auth DA],
PY [auth BA],
PYA [auth DA],
PZ [auth BA],
PZA [auth DA],
QAA [auth BA],
QAB [auth DA],
QBA [auth BA],
QBB [auth DA],
QCA [auth BA],
QCB [auth DA],
QD [auth AA],
QDA [auth BA],
QDB [auth DA],
QE [auth AA],
QEA [auth BA],
QEB [auth DN],
QF [auth AA],
QFA [auth BC],
QG [auth AA],
QGA [auth CA],
QH [auth AA],
QHA [auth CA],
QI [auth AA],
QIA [auth CA],
QJ [auth AA],
QJA [auth CA],
QK [auth AA],
QKA [auth CA],
QL [auth AC],
QLA [auth CA],
QM [auth AW],
QMA [auth CA],
QN [auth BA],
QNA [auth CA],
QO [auth BA],
QOA [auth CW],
QP [auth BA],
QPA [auth DA],
QQ [auth BA],
QQA [auth DA],
QR [auth BA],
QRA [auth DA],
QS [auth BA],
QSA [auth DA],
QT [auth BA],
QTA [auth DA],
QU [auth BA],
QUA [auth DA],
QV [auth BA],
QVA [auth DA],
QW [auth BA],
QWA [auth DA],
QX [auth BA],
QXA [auth DA],
QY [auth BA],
QYA [auth DA],
QZ [auth BA],
QZA [auth DA],
RAA [auth BA],
RAB [auth DA],
RBA [auth BA],
RBB [auth DA],
RCA [auth BA],
RCB [auth DA],
RD [auth AA],
RDA [auth BA],
RDB [auth DA],
RE [auth AA],
REA [auth BA],
REB [auth DO],
RF [auth AA],
RFA [auth BC],
RG [auth AA],
RGA [auth CA],
RH [auth AA],
RHA [auth CA],
RI [auth AA],
RIA [auth CA],
RJ [auth AA],
RJA [auth CA],
RK [auth AA],
RKA [auth CA],
RL [auth AD],
RLA [auth CA],
RM [auth AW],
RMA [auth CA],
RN [auth BA],
RNA [auth CA],
RO [auth BA],
ROA [auth CW],
RP [auth BA],
RPA [auth DA],
RQ [auth BA],
RQA [auth DA],
RR [auth BA],
RRA [auth DA],
RS [auth BA],
RSA [auth DA],
RT [auth BA],
RTA [auth DA],
RU [auth BA],
RUA [auth DA],
RV [auth BA],
RVA [auth DA],
RW [auth BA],
RWA [auth DA],
RX [auth BA],
RXA [auth DA],
RY [auth BA],
RYA [auth DA],
RZ [auth BA],
RZA [auth DA],
SAA [auth BA],
SAB [auth DA],
SBA [auth BA],
SBB [auth DA],
SCA [auth BA],
SCB [auth DA],
SD [auth AA],
SDA [auth BA],
SDB [auth DA],
SE [auth AA],
SEA [auth BA],
SEB [auth DO],
SF [auth AA],
SFA [auth BE],
SG [auth AA],
SGA [auth CA],
SH [auth AA],
SHA [auth CA],
SI [auth AA],
SIA [auth CA],
SJ [auth AA],
SJA [auth CA],
SK [auth AA],
SKA [auth CA],
SLA [auth CA],
SM [auth AW],
SMA [auth CA],
SN [auth BA],
SNA [auth CA],
SO [auth BA],
SOA [auth CW],
SP [auth BA],
SPA [auth DA],
SQ [auth BA],
SQA [auth DA],
SR [auth BA],
SRA [auth DA],
SS [auth BA],
SSA [auth DA],
ST [auth BA],
STA [auth DA],
SU [auth BA],
SUA [auth DA],
SV [auth BA],
SVA [auth DA],
SW [auth BA],
SWA [auth DA],
SX [auth BA],
SXA [auth DA],
SY [auth BA],
SYA [auth DA],
SZ [auth BA],
SZA [auth DA],
TAA [auth BA],
TAB [auth DA],
TBA [auth BA],
TBB [auth DA],
TCA [auth BA],
TCB [auth DA],
TD [auth AA],
TDA [auth BA],
TDB [auth DA],
TE [auth AA],
TEA [auth BA],
TEB [auth DV],
TF [auth AA],
TFA [auth BE],
TG [auth AA],
TGA [auth CA],
TH [auth AA],
THA [auth CA],
TI [auth AA],
TIA [auth CA],
TJ [auth AA],
TJA [auth CA],
TK [auth AA],
TKA [auth CA],
TL [auth AE],
TLA [auth CA],
TM [auth AW],
TMA [auth CA],
TN [auth BA],
TNA [auth CA],
TO [auth BA],
TOA [auth CX],
TP [auth BA],
TPA [auth DA],
TQ [auth BA],
TQA [auth DA],
TR [auth BA],
TRA [auth DA],
TS [auth BA],
TSA [auth DA],
TT [auth BA],
TTA [auth DA],
TU [auth BA],
TUA [auth DA],
TV [auth BA],
TVA [auth DA],
TW [auth BA],
TWA [auth DA],
TX [auth BA],
TXA [auth DA],
TY [auth BA],
TYA [auth DA],
TZ [auth BA],
TZA [auth DA],
UAA [auth BA],
UAB [auth DA],
UBA [auth BA],
UBB [auth DA],
UCA [auth BA],
UCB [auth DA],
UD [auth AA],
UDA [auth BA],
UDB [auth DA],
UE [auth AA],
UEA [auth BA],
UF [auth AA],
UFA [auth BF],
UG [auth AA],
UGA [auth CA],
UH [auth AA],
UHA [auth CA],
UI [auth AA],
UIA [auth CA],
UJ [auth AA],
UJA [auth CA],
UK [auth AA],
UKA [auth CA],
UL [auth AL],
ULA [auth CA],
UM [auth AW],
UMA [auth CA],
UN [auth BA],
UNA [auth CA],
UO [auth BA],
UOA [auth CX],
UP [auth BA],
UPA [auth DA],
UQ [auth BA],
UQA [auth DA],
UR [auth BA],
URA [auth DA],
US [auth BA],
USA [auth DA],
UT [auth BA],
UTA [auth DA],
UU [auth BA],
UUA [auth DA],
UV [auth BA],
UVA [auth DA],
UW [auth BA],
UWA [auth DA],
UX [auth BA],
UXA [auth DA],
UY [auth BA],
UYA [auth DA],
UZ [auth BA],
UZA [auth DA],
VAA [auth BA],
VAB [auth DA],
VBA [auth BA],
VBB [auth DA],
VCA [auth BA],
VCB [auth DA],
VD [auth AA],
VDA [auth BA],
VDB [auth DA],
VE [auth AA],
VEA [auth BA],
VF [auth AA],
VFA [auth BF],
VG [auth AA],
VGA [auth CA],
VH [auth AA],
VHA [auth CA],
VI [auth AA],
VIA [auth CA],
VJ [auth AA],
VJA [auth CA],
VK [auth AA],
VKA [auth CA],
VLA [auth CA],
VM [auth AW],
VMA [auth CA],
VN [auth BA],
VO [auth BA],
VOA [auth D2],
VP [auth BA],
VPA [auth DA],
VQ [auth BA],
VQA [auth DA],
VR [auth BA],
VRA [auth DA],
VS [auth BA],
VSA [auth DA],
VT [auth BA],
VTA [auth DA],
VU [auth BA],
VUA [auth DA],
VV [auth BA],
VVA [auth DA],
VW [auth BA],
VWA [auth DA],
VX [auth BA],
VXA [auth DA],
VY [auth BA],
VYA [auth DA],
VZ [auth BA],
VZA [auth DA],
WAA [auth BA],
WAB [auth DA],
WBA [auth BA],
WBB [auth DA],
WCA [auth BA],
WCB [auth DA],
WD [auth AA],
WDA [auth BA],
WDB [auth DA],
WE [auth AA],
WEA [auth BA],
WF [auth AA],
WFA [auth BF],
WG [auth AA],
WGA [auth CA],
WH [auth AA],
WHA [auth CA],
WI [auth AA],
WIA [auth CA],
WJ [auth AA],
WJA [auth CA],
WK [auth AA],
WKA [auth CA],
WL [auth AT],
WLA [auth CA],
WM [auth AW],
WMA [auth CA],
WN [auth BA],
WNA [auth CE],
WO [auth BA],
WOA [auth D2],
WP [auth BA],
WPA [auth DA],
WQ [auth BA],
WQA [auth DA],
WR [auth BA],
WRA [auth DA],
WS [auth BA],
WSA [auth DA],
WT [auth BA],
WTA [auth DA],
WU [auth BA],
WUA [auth DA],
WV [auth BA],
WVA [auth DA],
WW [auth BA],
WWA [auth DA],
WX [auth BA],
WXA [auth DA],
WY [auth BA],
WYA [auth DA],
WZ [auth BA],
WZA [auth DA],
XAA [auth BA],
XAB [auth DA],
XBA [auth BA],
XBB [auth DA],
XCA [auth BA],
XCB [auth DA],
XD [auth AA],
XDA [auth BA],
XDB [auth DA],
XE [auth AA],
XEA [auth BA],
XF [auth AA],
XFA [auth BQ],
XG [auth AA],
XGA [auth CA],
XH [auth AA],
XHA [auth CA],
XI [auth AA],
XIA [auth CA],
XJ [auth AA],
XJA [auth CA],
XK [auth AA],
XKA [auth CA],
XL [auth AV],
XLA [auth CA],
XM [auth AW],
XMA [auth CA],
XN [auth BA],
XNA [auth CF],
XO [auth BA],
XOA [auth D5],
XP [auth BA],
XPA [auth DA],
XQ [auth BA],
XQA [auth DA],
XR [auth BA],
XRA [auth DA],
XS [auth BA],
XSA [auth DA],
XT [auth BA],
XTA [auth DA],
XU [auth BA],
XUA [auth DA],
XV [auth BA],
XVA [auth DA],
XW [auth BA],
XWA [auth DA],
XX [auth BA],
XXA [auth DA],
XY [auth BA],
XYA [auth DA],
XZ [auth BA],
XZA [auth DA],
YAA [auth BA],
YAB [auth DA],
YBA [auth BA],
YBB [auth DA],
YCA [auth BA],
YCB [auth DA],
YD [auth AA],
YDA [auth BA],
YDB [auth DA],
YE [auth AA],
YEA [auth BA],
YF [auth AA],
YFA [auth BS],
YG [auth AA],
YGA [auth CA],
YH [auth AA],
YHA [auth CA],
YI [auth AA],
YIA [auth CA],
YJ [auth AA],
YJA [auth CA],
YK [auth AA],
YKA [auth CA],
YL [auth AV],
YLA [auth CA],
YM [auth AX],
YMA [auth CA],
YN [auth BA],
YNA [auth CG],
YO [auth BA],
YP [auth BA],
YPA [auth DA],
YQ [auth BA],
YQA [auth DA],
YR [auth BA],
YRA [auth DA],
YS [auth BA],
YSA [auth DA],
YT [auth BA],
YTA [auth DA],
YU [auth BA],
YUA [auth DA],
YV [auth BA],
YVA [auth DA],
YW [auth BA],
YWA [auth DA],
YX [auth BA],
YXA [auth DA],
YY [auth BA],
YYA [auth DA],
YZ [auth BA],
YZA [auth DA],
ZAA [auth BA],
ZAB [auth DA],
ZBA [auth BA],
ZBB [auth DA],
ZCA [auth BA],
ZCB [auth DA],
ZD [auth AA],
ZDA [auth BA],
ZDB [auth DA],
ZE [auth AA],
ZEA [auth BB],
ZF [auth AA],
ZFA [auth BU],
ZG [auth AA],
ZGA [auth CA],
ZH [auth AA],
ZHA [auth CA],
ZI [auth AA],
ZIA [auth CA],
ZJ [auth AA],
ZJA [auth CA],
ZK [auth AA],
ZKA [auth CA],
ZL [auth AV],
ZLA [auth CA],
ZM [auth AX],
ZMA [auth CA],
ZN [auth BA],
ZNA [auth CI],
ZO [auth BA],
ZOA [auth DA],
ZP [auth BA],
ZPA [auth DA],
ZQ [auth BA],
ZQA [auth DA],
ZR [auth BA],
ZRA [auth DA],
ZS [auth BA],
ZSA [auth DA],
ZT [auth BA],
ZTA [auth DA],
ZU [auth BA],
ZUA [auth DA],
ZV [auth BA],
ZVA [auth DA],
ZW [auth BA],
ZWA [auth DA],
ZX [auth BA],
ZXA [auth DA],
ZY [auth BA],
ZYA [auth DA],
ZZ [auth BA],
ZZA [auth DA]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.27 Å
  • R-Value Free: 0.277 
  • R-Value Work: 0.214 
  • R-Value Observed: 0.217 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 209.45α = 90
b = 449.379β = 90
c = 619.589γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
MxDCdata collection
xia2data scaling
Cootmodel building
DIALSdata reduction
PHENIXphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Canadian Institutes of Health Research (CIHR)CanadaPJT-162365
Canadian Institutes of Health Research (CIHR)CanadaFDN-148472
National Institutes of Health/National Institute on Deafness and Other Communication Disorders (NIH/NIDCD)United StatesDC016257
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United StatesAI126874

Revision History  (Full details and data files)

  • Version 1.0: 2021-06-02
    Type: Initial release
  • Version 1.1: 2021-07-14
    Changes: Database references
  • Version 1.2: 2023-10-18
    Changes: Data collection, Database references, Refinement description