5V2P

CaV beta2a subunit: CaV1.2 AID-CAP complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.184

Literature

Macromolecules
Sequence Display for 5V2P

Classification: TRANSPORT PROTEIN

Total Structure Weight: 42171.30

Macromolecule Entities
Molecule Chains Length Organism Details
Voltage-dependent L-type calcium channel subunit beta-2 A 347 Rattus norvegicus Fragment: beta2a subunit (UNP residues 24-145,254-476)
Gene Name(s): Cacnb2 Cacnlb2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Voltage-dependent L-type calcium channel subunit alpha-1C B 19 Homo sapiens Fragment: AID-CAP (UNP residues 427-445)
Mutation: K427C, Q428S, Q429P, E432C
Gene Name(s): CACNA1C Gene View CACH2 CACN2 CACNL1A1 CCHL1A1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
8VY
Query on 8VY

B 1,3-bis(bromomethyl)benzene
alpha,alpha'-dibromo-m-xylene (Synonym)
C8 H8 Br2
OXHOPZLBSSTTBU-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
1PE
Query on 1PE

A PENTAETHYLENE GLYCOL
PEG400 (Synonym)
C10 H22 O6
JLFNLZLINWHATN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NI
Query on NI

A NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.184
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 81.81 α = 90.00
b = 81.81 β = 90.00
c = 163.27 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-03-06
  • Released Date: 2017-07-19
  • Deposition author(s): Findeisen, F., Campiglio, M., Jo, H., Rumpf, C.H., Pope, L., Flucher, B., Degrado, W.F., Minor, D.L.

Revision History

  • Version 1_0: 2017-07-19

    Type: Initial release

  • Version 1_1: 2017-08-23

    Type: Data collection

  • Version 1_2: 2017-09-13

    Type: Author supporting evidence