Crystal structure of BioA / 7,8-diaminopelargonic acid aminotransferase / DAPA synthase from Citrobacter rodentium, PLP complex
Stogios, P.J.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase | 431 | environmental samples | Mutation(s): 0  Gene Names: bioA, ROD_07751 EC: 2.6.1.62 | ||
UniProt | |||||
Find proteins for D2TPI3 (Citrobacter rodentium (strain ICC168)) Explore D2TPI3  Go to UniProtKB:  D2TPI3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D2TPI3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TAR Query on TAR | B [auth A], C [auth A] | D(-)-TARTARIC ACID C4 H6 O6 FEWJPZIEWOKRBE-LWMBPPNESA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
LLP Query on LLP | A | L-PEPTIDE LINKING | C14 H22 N3 O7 P | LYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 75.369 | α = 90 |
b = 88.306 | β = 90 |
c = 63.274 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
PHENIX | model building |
Coot | model building |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID) | United States | HHSN272201200026C |