5L9E

CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.242

Literature

Macromolecules
Sequence Display for 5L9E

Classification: Lyase / Inhibitor

Total Structure Weight: 125092.59

Macromolecule Entities
Molecule Chains Length Organism Details
Carbonic anhydrase 2 A, B, C, D 260 Homo sapiens EC#: 4.2.1.1 IUBMB
Gene Name(s): CA2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
6H0
Query on 6H0

A, B, C, D ~{N}-[[3-(4-formamidobutoxy)phenyl]methyl]- 4-sulfamoyl-benzamide
C19 H23 N3 O5 S
ASGCSQAUBAMMLK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
QVE
Query on QVE

A, B, C, D 8-azanyl-4-(2-hydroxy-2-oxoethyloxy)quinoline- 2-carboxylic acid
C12 H10 N2 O5
ISBWTKCQKHNORE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
QUJ
Query on QUJ

A, B, C, D 8-azanyl-4-(2-methylpropoxy)quinoline-2-carboxylic acid
C14 H16 N2 O3
UQMUZAYVJKDBFB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B, C, D GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.242
  • Space Group: I 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 125.97 α = 90.00
b = 75.14 β = 100.08
c = 141.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-06-10
  • Released Date: 2017-06-21
  • Deposition author(s): VALLADE, M., LANGLOIS D'ESTAINTOT, B., GRANIER, T., HUC, I.

Revision History

  • Version 1_0: 2017-06-21

    Type: Initial release