5CDY

The crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase (FabG) from Yersinia pestis at 2.85A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 5CDY

Classification: OXIDOREDUCTASE

Total Structure Weight: 103441.69

Macromolecule Entities
Molecule Chains Length Organism Details
3-oxoacyl-[acyl-carrier protein] reductase A, B, C, D 244 Yersinia pestis EC#: 1.1.1.100 IUBMB
Gene Name(s): fabG fabG10 y1758 YP_2255 YPO1599
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

B, C GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.246
  • R-Value Work: 0.212
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 64.74 α = 90.00
b = 96.85 β = 104.91
c = 71.55 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-07-06
  • Released Date: 2015-11-18
  • Deposition author(s): Nanson, J.D., Forwood, J.K.

Revision History

  • Version 1_0: 2015-11-18

    Type: Initial release