Crystal structure of the ectodomain from a LDLR close homologue in complex with its physiological ligand.
Hirai, H., Yasui, N., Yamashita, K., Tabata, S., Yamamoto, M., Takagi, J., Nogi, T.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Low-density lipoprotein receptor-related protein 8 | A [auth B] | 85 | Homo sapiens | Mutation(s): 0  Gene Names: LRP8, APOER2 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q14114 (Homo sapiens) Explore Q14114  Go to UniProtKB:  Q14114 | |||||
PHAROS:  Q14114 GTEx:  ENSG00000157193  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q14114 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA Query on CA | B, C [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 31.162 | α = 90 |
b = 41.78 | β = 90 |
c = 55.063 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
Aimless | data scaling |
MOLREP | phasing |