Crystal structure of the ectodomain from a LDLR close homologue in complex with its physiological ligand.
Hirai, H., Yasui, N., Yamashita, K., Tabata, S., Yamamoto, M., Takagi, J., Nogi, T.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Low-density lipoprotein receptor-related protein 8 | A [auth B] | 85 | Homo sapiens | Mutation(s): 0  Gene Names: LRP8, APOER2 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q14114 (Homo sapiens) Explore Q14114  Go to UniProtKB:  Q14114 | |||||
PHAROS:  Q14114 GTEx:  ENSG00000157193  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q14114 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA Query on CA | B, C [auth B] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 31.162 | α = 90 |
b = 41.78 | β = 90 |
c = 55.063 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
XDS | data reduction |
Aimless | data scaling |
MOLREP | phasing |