Crystal structure of human NLRP12 PYD domain and implication in homotypic interaction
Jin, T., Huang, M., Jiang, J., Smith, P., Xiao, T.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Maltose-binding periplasmic protein,NACHT, LRR and PYD domains-containing protein 12 | 480 | Escherichia coli O157:H7, Homo sapiens This entity is chimeric | Mutation(s): 0  Gene Names: malE, Z5632, ECs5017, NLRP12, NALP12, PYPAF7, RNO | ||
UniProt | |||||
Find proteins for P0AEX9 (Escherichia coli (strain K12)) Explore P0AEX9  Go to UniProtKB:  P0AEX9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P0AEX9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FMT Query on FMT | E [auth A], F [auth A], I [auth B], J [auth B] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N | |||
NA Query on NA | G [auth A] H [auth A] K [auth B] L [auth B] M [auth B] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Entity ID: 2 | |||||
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ID | Chains | Name | Type/Class | 2D Diagram | 3D Interactions |
PRD_900001 Query on PRD_900001 | C, D | alpha-maltose | Oligosaccharide / Nutrient |
Length ( Å ) | Angle ( ˚ ) |
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a = 52.72 | α = 90 |
b = 103.62 | β = 90 |
c = 186.74 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |
PHASER | phasing |