Structure of Type Iif Restriction Endonuclease Ngomiv with Cognate Uncleaved DNA
Manakova, E.N., Grazulis, S., Zaremba, M., Tamulaitiene, G., Golovenko, D., Siksnys, V.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
TYPE-2 RESTRICTION ENZYME NGOMIV | 286 | Neisseria gonorrhoeae | Mutation(s): 0  EC: 3.1.21.4 | ||
UniProt | |||||
Find proteins for P31032 (Neisseria gonorrhoeae) Explore P31032  Go to UniProtKB:  P31032 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P31032 | ||||
Sequence AnnotationsExpand | |||||
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Find similar nucleic acids by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Length | Organism | Image | |
5'-D(*TP*GP*CP*GP*CP*CP*GP*GP*CP*GP*CP)-3' | C [auth E], D [auth G] | 11 | Neisseria gonorrhoeae | ||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CA Query on CA | E [auth A], F [auth B], G [auth E] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 68.899 | α = 90 |
b = 90.081 | β = 90 |
c = 92.711 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
MOSFLM | data reduction |
SCALA | data scaling |
AMoRE | phasing |