4YMH

Crystal structure of SAH-bound Podospora anserina methyltransferase PaMTH1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.88 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.164

Literature

Macromolecules
Sequence Display for 4YMH

Classification: TRANSFERASE

Total Structure Weight: 109712.61

Macromolecule Entities
Molecule Chains Length Organism Details
Putative SAM-dependent O-methyltranferase A, B, C, D 240 Podospora anserina Gene Name(s): mth1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SAH
Query on SAH

A, B, C, D S-ADENOSYL-L-HOMOCYSTEINE
C14 H20 N6 O5 S
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEG
Query on PEG

A, B, D DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.88 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.164
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 84.23 α = 90.00
b = 239.29 β = 90.00
c = 50.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-03-06
  • Released Date: 2015-05-27
  • Deposition author(s): KUDLINZKI, D., LINHARD, V.L., CHATTERJEE, D., SAXENA, K., SREERAMULU, S., SCHWALBE, H.

Revision History

  • Version 1_0: 2015-05-27

    Type: Initial release

  • Version 1_1: 2015-06-03

    Type: Database references

  • Version 1_2: 2015-07-08

    Type: Database references